| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3497 |
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| Symbol | |
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| ID | 7382031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3747460 |
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| End bp | 3748731 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656816 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002554922 |
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| Protein GI | 222112658 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACTCC AGACCTTGCC GCGCCACAGG CGGGCAAGGT CGCGCCCGAA
GCGGTGGCGC TGCGCGCCCA GCCGCGCCCG GTCACACGTT TGAACCGGCG CACGCTGGCC
ATTCTCGTCG GCGGCCTGTC GGTCGCAGTG CTCGGGGCCA CGATTTGGTC GTTGCAGCCG
CATCGGCGCG GGGCGGGCGA GCAGACCGAG CTTTACAACG TCGATCGCGT CTCGAAGTCG
GAAGGGCTGG ACGGACTGCC TGCCGACTAC TCGAAGCTGC CGCCGAAGGT GCCTGAGCTG
GGGCCGGCGC TGCCGGGCGA CCTCGGCCCG GCCATCGTGC ATTCTCAACA GCCGGTGACG
CCAGCCTACG CACCGCCGGG ACATGATCCG GCGGACGCCC GGCGCAAGGA GGCCGATGCA
GCGGCGGGTT CGTCGGTGTT CTTCCGTTCG GGCAACCAAG GCAAGGCCAC CGCGCCGGTC
ACGGCGCAAG CCGCTGCGGC TGCGCCCGGT AGTGCCTTGG CGGGCTTCGA CCCGCTGGCC
GCTGGCCCGG CCTCTACGGC GGCCCAGTCA TCCGACCCGA CCGCCGTGCA GAACCGGCAA
GACCAGAAAG AGGCTTTCCT GAAAGGCGGC TCTACGGAAA CCCGCAATTC CGGCAATCTG
CAAATGCCGT CCTCGCCGTA TCAGGTAATG GCCGGGACGG TGATGGCTGG GGCGCTGGTC
ACGGGCATCA AGTCCGATTT GCCGGGCGAC GTGATCGCCA CGGTGACGGA GCCGGTCTAT
GACTCGGCTA CGGGCAAGTT CCTGCTGATC CCACAGGGAT CGCGCATCCT GGGCAAGTAC
AACAGCCAGG TGAGCTACGG GCAGAGCCGC GTGCAGGTGG TGTGGAACCG CGTCATCCTG
CCGGACACGT CATCGCTGAA GCTCGACAAC CTGGCGGGCA CCGACCCTGC CGGCTACGCC
GGCCTGGAGG ATGGCGTCGA TTGGCATTGG GATCGCGTCT TTGCCGGTGC GGCGCTGACC
ACGTTGCTGG GCGTGGGCGC CGAACTGGCC GCGCCGGAGA ACCGGCAGAA CGGCAATCGC
ATCGTGATCG CTGGGCGCGA CAGCGCACAG GACAGCATCA ATCAGGTCGG ACAGGAGATG
ACCCGGCGCA ACATGAACAT CCAGTCGACG CTGACCGAGC GGCCGGGCCT GCCGGTGCGC
ATCATCGTCA ACCGCGATCT GGTGTTGCGG CCGTACCAGC CGATGTTCTT CCAGCGGGGG
GCCATGCAAT GA
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| Protein sequence | MSQDDTPDLA APQAGKVAPE AVALRAQPRP VTRLNRRTLA ILVGGLSVAV LGATIWSLQP
HRRGAGEQTE LYNVDRVSKS EGLDGLPADY SKLPPKVPEL GPALPGDLGP AIVHSQQPVT
PAYAPPGHDP ADARRKEADA AAGSSVFFRS GNQGKATAPV TAQAAAAAPG SALAGFDPLA
AGPASTAAQS SDPTAVQNRQ DQKEAFLKGG STETRNSGNL QMPSSPYQVM AGTVMAGALV
TGIKSDLPGD VIATVTEPVY DSATGKFLLI PQGSRILGKY NSQVSYGQSR VQVVWNRVIL
PDTSSLKLDN LAGTDPAGYA GLEDGVDWHW DRVFAGAALT TLLGVGAELA APENRQNGNR
IVIAGRDSAQ DSINQVGQEM TRRNMNIQST LTERPGLPVR IIVNRDLVLR PYQPMFFQRG
AMQ
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