| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3495 |
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| Symbol | trmE |
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| ID | 7382029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3745475 |
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| End bp | 3746878 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643656814 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002554920 |
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| Protein GI | 222112656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGC GCCATTCCGA CCCCATCGTT GCCATTGCCA CCGCGCCGGG GCGCGGCGCG
GTCGGCATCG TGCGGGTCTC GGGCAAGCAG ATCGGTGCAC TGGTGCAGGC GCTGTGCGGC
CGTGCGCTCA AGCCGCGCGA GGCCACCTAT CTGCCGTTTC GGGATGCCGC GGGCCAGGCC
ATCGACCAGG GGCTGGCGCT GTACTTTCCC GCGCCGCACA GCTACACCGG CGAGGACGTG
CTGGAGCTGC AGGCCCATGG CGGCCCCGTG GTGCTGCAGC TGCTGCTGGC GCGCTGCCTG
GAGGCTGCCA CGGGCGGCGT GCTGGACCGC CTGCGGCTGG CCGAGCCCGG CGAGTTCACC
GAGCGCGCCT TCCTCAACAA CAAGATCGAC CTGGCCCAGG CCGAGGCGAT CGCCGACCTG
ATCGACGCCA GCACCGAGGC GGCCGCGCGC GGCGCCAGCC GTTCGCTGTC GGGCGACTTC
TCGCGCGAGA TCCACACGCT GCGTGACGCG CTGGTGCACC TGCGCATGCT GGTGGAGGCC
ACCCTGGACT TTCCTGAAGA GGAAATCGAC TTCCTGCGCA AGGCAGACGC GCGCGGGCAG
CTATCGAATT TGCAGCAATC GCTGGCCCGC GTGATGCAGC GTGCCGGCCA AGGCGCGTTG
CTGCGCGAGG GCATTAAGGT GGTGATCGCC GGGCAGCCTA ACGCGGGCAA GAGCTCGCTG
CTGAACGCGC TGGCAGGGGC GGAACTGGCC ATCGTCACGC CGATCGCCGG CACCACGCGC
GACAAGGTGC AGCAGACCAT CCAGATCGAG GGCGTGCCGC TGCACGTGAT CGACACGGCG
GGCCTGCGCG AAAGCGACGA CGAGGTCGAG CGCATCGGCA TCGCCCGCGC CTGGGACGAG
ATCGCGGGCG CCGACGCGGT GCTGTTCCTG CACGACCTCA CGCGCTGGGG CAGTGCGCAG
TACCAGGACG ACGACGCCGC CATTGCGCAC ACGCTCTCCA CCCGGCTGCC CGCGGGCGTG
CCGGTGGTCG ACGTCTGGAA CAAGGCCGAC GCCGCCCCGC AGGCGGCGGC GCCTGCGCGC
GAGGGTGAGA GCCAGGCGGT GCTGCTGTCC GCGCGCACCG GCCAGGGGCT GGATACGCTG
CGTCGGCAAT TGCTGCAAAT CGCGGGCTGG CAGTCGGCTG CGGAGGGCGT GTACATCGCC
CGCGCGCGCC ACATCGAAGC CTTGCGCGCC GTGGACGCCC ACCTCATGGA GGCGGCCGCG
CAGCTGGAAA GCGACGGGCC GGCGCTGGAC CTGCTGGCCG AGGAGCTGCG CCTGGCGCAA
AACGCCCTCA ACACCATCAC GGGCGAGTTC ACGTCCGACG ATCTGCTCGG TGTCATCTTC
TCCAGCTTCT GCATCGGCAA ATAG
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| Protein sequence | MLPRHSDPIV AIATAPGRGA VGIVRVSGKQ IGALVQALCG RALKPREATY LPFRDAAGQA
IDQGLALYFP APHSYTGEDV LELQAHGGPV VLQLLLARCL EAATGGVLDR LRLAEPGEFT
ERAFLNNKID LAQAEAIADL IDASTEAAAR GASRSLSGDF SREIHTLRDA LVHLRMLVEA
TLDFPEEEID FLRKADARGQ LSNLQQSLAR VMQRAGQGAL LREGIKVVIA GQPNAGKSSL
LNALAGAELA IVTPIAGTTR DKVQQTIQIE GVPLHVIDTA GLRESDDEVE RIGIARAWDE
IAGADAVLFL HDLTRWGSAQ YQDDDAAIAH TLSTRLPAGV PVVDVWNKAD AAPQAAAPAR
EGESQAVLLS ARTGQGLDTL RRQLLQIAGW QSAAEGVYIA RARHIEALRA VDAHLMEAAA
QLESDGPALD LLAEELRLAQ NALNTITGEF TSDDLLGVIF SSFCIGK
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