| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3489 |
|---|
| Symbol | |
|---|
| ID | 7382023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3739648 |
|---|
| End bp | 3740226 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643656808 |
|---|
| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
|---|
| Protein accession | YP_002554914 |
|---|
| Protein GI | 222112650 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGT CCAATGCCAC GCCGCTGCCC CCCCTGCAAC CGGCCCTGCA GTTCGATCCG
CAACTCCTGC TGCTGGCGCA GCCGGTGCGC GTCGCCTTCT TCGACGTGGA CGGTGTGCTG
ACCGACGGCG GCCTGTATTT CTCTGAAGTG GGCGAGACCC TCAAGCGTTT TCATACGCTT
GACGGACACG GCATCAAGCT GCTGCAGCAG GCGGGCATCA CGCCCGCGGT GGTCACGGGG
CGTGATTCAC CGGCGCTGCG GCTGCGCTTG AAAGCGCTGG GGGTGATGCA TGCACGTTTC
GGCACCGAGG ACAAGCGCCC GGCGGCCGAG TCCATCCTGG CCGAGCTGGG CCTGTCGTGG
CCTCAGGCCG CCGCCATCGG AGACGACTGG CCCGACCTGC CGGTGATGCG CCGTGTGGCC
TTCGCCTGCG CGCCCGCACA GGCCCACATC GAGGCCCGCG CCGTCGCCCA CCATGTCACC
GCCGCGCCGG GTGGCGCGGG TGCGGCGCGG GAGTTCTGCG ACCTGCTGCT GGTCGCCAGT
GGCCGTTACG CCGGTCTGTT GGCCGCGCAT GCCGCATGA
|
|---|
| Protein sequence | MSQSNATPLP PLQPALQFDP QLLLLAQPVR VAFFDVDGVL TDGGLYFSEV GETLKRFHTL
DGHGIKLLQQ AGITPAVVTG RDSPALRLRL KALGVMHARF GTEDKRPAAE SILAELGLSW
PQAAAIGDDW PDLPVMRRVA FACAPAQAHI EARAVAHHVT AAPGGAGAAR EFCDLLLVAS
GRYAGLLAAH AA
|
|---|
| |