Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3486 |
Symbol | |
ID | 7382020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3737672 |
End bp | 3738139 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643656805 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_002554911 |
Protein GI | 222112647 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACA AACTGTACGT CGGCAATCTG CCGTACTCGG TGCGTGACCA AGATCTGGAG CAAGCCTTCA GCCAGTTCGG TGCGGTGACC AGCGCCAAGG TCATGATGGA GCGCGACACC GGCCGCTCCA AAGGCTTTGG CTTCGTGGAA ATGGGCAGCG ATGCCGAAGC CCAGGAAGCC ATCAATGGCA TGAACGGCCA GTCCCTCGGC GGCCGCAGCA TTGTCGTGAA TGAAGCCCGT CCCATGGAAG CGCGCCCCCC CCGCAGCGGT GGCGGCTTTG GTGGTGGTGG CGGCGGCTAC GGCGGCGGCC GCAGCGGCGG TGGTGGCTAC GGCGGCGGTG GTGGCGGCTA CGGCGGCGGT GGTGGTGGCC GCAGCGAAGG CGGCTTTCGC AGCCCCTACG GCTCCGGTCC ACGTGGTGGC GGCGGTGGCC GTGGCGGCTA CGGCGGTGGC GGCAACAACG GATATTGA
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Protein sequence | MGNKLYVGNL PYSVRDQDLE QAFSQFGAVT SAKVMMERDT GRSKGFGFVE MGSDAEAQEA INGMNGQSLG GRSIVVNEAR PMEARPPRSG GGFGGGGGGY GGGRSGGGGY GGGGGGYGGG GGGRSEGGFR SPYGSGPRGG GGGRGGYGGG GNNGY
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