| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3484 |
|---|
| Symbol | |
|---|
| ID | 7382018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3736008 |
|---|
| End bp | 3736586 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643656803 |
|---|
| Product | protein of unknown function UPF0016 |
|---|
| Protein accession | YP_002554909 |
|---|
| Protein GI | 222112645 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2119] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCT TCCTCGTCTC CACCGCCATC GTCACCCTTG CCGAGATGGG TGACAAGACC
CAACTGCTGT CGCTGGTGCT CGCCGCACGC TTTCGCAAGC CCTGGCCCAT CGTGCTGGGC
ATTTTCGTGG CCACGCTGGC CAACCACGCG CTGGCGGGCG CGGTGGGGTC ATGGGTGACC
ACCGTGCTGG GGCCGCAGGT GCTGCGCTGG GTGCTGGGTC TTTCCTTCAT CGCCATGGCG
GTGTGGATGC TGATTCCCGA CAAGCTGGAC GACGACGGTG ACGGTGCGGC GCCGCGCTTC
GGCGTGTTCG GCACGACGCT GGTGGCGTTC TTCCTGGCCG AGATGGGCGA CAAGACGCAG
GTCGCCACCG TGATGCTGGC TGCGCAGTAC AGCGCCTACT TCTGGGTGGT GGCGGGTACT
ACGCTGGGCA TGATGCTGGC CAATGCGCCC GTGGTCTGGC TGGGGGATCG GCTGGTGAAG
AAGGTGCCGA TCCGCGTGGT GCACTTGGTG TCTGCGTTGA TCTTCCTGGT CTTGGGCCTG
CTGGCGCTGT TTGCGGGAGA TGCGACGCCT TTGGCATAA
|
|---|
| Protein sequence | MEAFLVSTAI VTLAEMGDKT QLLSLVLAAR FRKPWPIVLG IFVATLANHA LAGAVGSWVT
TVLGPQVLRW VLGLSFIAMA VWMLIPDKLD DDGDGAAPRF GVFGTTLVAF FLAEMGDKTQ
VATVMLAAQY SAYFWVVAGT TLGMMLANAP VVWLGDRLVK KVPIRVVHLV SALIFLVLGL
LALFAGDATP LA
|
|---|
| |