| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3479 |
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| Symbol | |
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| ID | 7382013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3729057 |
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| End bp | 3730520 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656798 |
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| Product | peptidase M20 |
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| Protein accession | YP_002554904 |
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| Protein GI | 222112640 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.282817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC GCCTGCCCGC CGCCGCCCTG GATGCCGCAC TCGCGCTGGA ACGCGTGGGG
CGGGTGTGGG ACGAAGACAT CCTGCGGCAG CTCACCGACT ACATCCGCAT TCCCGCCAAG
TCGCCGGGCT TTGCGCCCGA CTGGCGCGAA CAGGGCCACC TGGAGACTGT GCTGCGCAAC
GCCGCGCAGT GGGTCGAGGC CCAAAAGGTG GCGGGCCTGC AGTTGGAGAT CGTGCGCCTG
CCAGGGCGCA CGCCGGTACT GTTCTTCGAG GTGGCGGCCA CCCAGCCGCG GTCCACGCAG
ACCGTGCTGA TGTACGGCCA CCTGGACAAG CAGCCCGAAT TCGAGGGCTG GCGCAGCGAC
CTGGGCCCGT GGACACCCAA GTACGAGGAC GGCAAGCTCT ACGGCCGGGG CGGCGCCGAC
GACGGCTACG CGGTCTACGC CAGCGTGGCC GCGGTGCAGG AGCTCAAGCG CCAGAACGTG
CCGCACCCGC GCATCGTGGG CCTGATCGAG ACCTGCGAGG AGAGCGGCTC CGCCGACCTG
CTGCCTTACA TCGACGCGCT GAAGACCCGC CTGGGCGACG TGGCGCTGGT GATCTGTCTC
GACTCGGGTG CGGGCAACTA CGACCAGCTG TGGCTCACCA CCAGCCTGCG CGGCATGGCC
AGCGGCACGC TCAAGGTCCA GATCCTCACC GAGGGGGTGC ACTCGGGCGA CTCATCGGGT
CTGGTGCCGT CGTCGTTTCG AATCATGCGC CAGGTGCTCG ACCGGCTGGA GGACTCGGCC
ACGGGCCGCC TGCTGCCTGC GCACTTCCAC TGCGAGGTGC CGCCCGACCG TCTGGCGCAG
GCGCGGGCCA CCGCCGCCAT CCTGGGCGAG GAGGTCTACA AGCGTTTCCC CTGGGCGCAT
GCCGACTGCG GTGGCAGTAC GGTGTTTGCC CTGCCCACCA CCACCGACCC GGTACAGGCG
CTGCTCAAGC GCACCTGGGA GCCCACGCTC AGCGTGACGG GGGCCGAGGG CTTCCCCGCC
CTCAAGGATG CGGGCAACGT GCTGCGCCCC TACACGGCCT TCAAGCTGTC GTTGCGCCTG
CCGCCGCTGG TGGACGCCGC CGCCTGCCTG CAGGAGATGA AGGCCGTGCT GGAGGACAAC
GCACCCTACC AGGCCAAGGT CACCTTCGCC CCCGATGGCG CGGCCAGCGG CTGGAACGCC
CCGGCCATCA CGCCGTGGTT CGAGCAGGCG CTCAACGCCG CGAGCCAGGC GCACTTCGGC
GCGCCTTGCG GCTACATCGG CCAGGGCGGC ACGATTCCGC TCATGAACAT GCTGAGCCGC
GGTTTCCCGA CGGCGCAGAT GATGGTCTGC GGCGTGCTCG GCCCCAAGAG CAACGCCCAC
GGCCCCAACG AGTTCCTGCA CGTGCCCTAC GCCAAGAAGC TCACCGCGGC CGTGGCGCAG
GTGATCGCCA GCATGCCGGC CTGA
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| Protein sequence | MNDRLPAAAL DAALALERVG RVWDEDILRQ LTDYIRIPAK SPGFAPDWRE QGHLETVLRN
AAQWVEAQKV AGLQLEIVRL PGRTPVLFFE VAATQPRSTQ TVLMYGHLDK QPEFEGWRSD
LGPWTPKYED GKLYGRGGAD DGYAVYASVA AVQELKRQNV PHPRIVGLIE TCEESGSADL
LPYIDALKTR LGDVALVICL DSGAGNYDQL WLTTSLRGMA SGTLKVQILT EGVHSGDSSG
LVPSSFRIMR QVLDRLEDSA TGRLLPAHFH CEVPPDRLAQ ARATAAILGE EVYKRFPWAH
ADCGGSTVFA LPTTTDPVQA LLKRTWEPTL SVTGAEGFPA LKDAGNVLRP YTAFKLSLRL
PPLVDAAACL QEMKAVLEDN APYQAKVTFA PDGAASGWNA PAITPWFEQA LNAASQAHFG
APCGYIGQGG TIPLMNMLSR GFPTAQMMVC GVLGPKSNAH GPNEFLHVPY AKKLTAAVAQ
VIASMPA
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