| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3477 |
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| Symbol | |
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| ID | 7382011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3727071 |
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| End bp | 3728099 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643656796 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002554902 |
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| Protein GI | 222112638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.377939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGGT TGTCGGCGCT GCTGATGCTG GGCTGCATCG GGGCGATGCA CCTGGTGGCC
GCCGCAGGCC TGACCGATCC CGTGCCGGTG TACTGGTGGA CCCTGGCGTG CGGCGCGGGC
ATCACCACGG TGTTCGTGCT CATCCGCAGC GGCGCCAGCC GGCGCTTTGC CGACCCGTCG
CTCACACTGT TCCAGATCGT CTATGTGATC GCCGGCCCCG CGCGCGGTAT TGCGCCACCC
ATTCTCGCGG TCATCATGAT GTTCGGCGTC TTCGGGCTCA CCCCCCGCCA GATGGTGGGC
GTGGCGCTCT ACGGGCTGGT GGCCTTTGGT GCAGCGGGCG CCGTGGTGCA GTGGTGGCAT
CCGGCTTGGC TATCGCCCGA CAGCCAGCCC CCGGCGCTGT CGGCGGCCTA CCTGGTCATG
ATTGCGGTGG TGTTGGCCAG CAGCACCTTC CTCACCACGC GCGTACACAG CGCGCGGGCC
CGTCTGCGCA GCCAAAAGCG CGAGCTGGCC GCCGCCGTGG AGCAGATCCG CGAACTGGCC
ATCCGCGACG AGCTCACAGG CCTGCCCAAC CGCCGCTGCA TGCTGGAGAT GATGCGGCTG
GAGCATGCGC GCGCGCAGCG CAGCCGGCAG CCCCTGCTGC TGGCGCAGCT GGACCTGGAC
CATTTCAAGG CGGTGAACGA CACGCACGGC CATGCGGCCG GCGACGTGGC GCTGCAGTCG
TTCGCGCAGA CGGTGCACGG CTGCGTGCGG GCCAGCGACC TCCTGGCGCG CTGGGGCGGC
GAGGAGTTCC TGCTGCTCAT GGCCAATACC CACCCGGCGG ACGGCACGCG TCTGCTGGAG
CGCGTGCGCG CCACCGTGGC CGCCACGCCT GTGGCCCTGC CAGGCGGCAC GCAGCTGTCT
CTGACGGTGT CGGTCGGGCT GGCGGAACTG GCCCCCGGCG AGAGCACCGC CGCGCTGCTG
CAGCGCGCGG ACGCGGCCCT CTACGGCGCC AAGCGCCTGG GGCGCAACCG CGTGCTGCTG
GCGCATTGA
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| Protein sequence | MAGLSALLML GCIGAMHLVA AAGLTDPVPV YWWTLACGAG ITTVFVLIRS GASRRFADPS
LTLFQIVYVI AGPARGIAPP ILAVIMMFGV FGLTPRQMVG VALYGLVAFG AAGAVVQWWH
PAWLSPDSQP PALSAAYLVM IAVVLASSTF LTTRVHSARA RLRSQKRELA AAVEQIRELA
IRDELTGLPN RRCMLEMMRL EHARAQRSRQ PLLLAQLDLD HFKAVNDTHG HAAGDVALQS
FAQTVHGCVR ASDLLARWGG EEFLLLMANT HPADGTRLLE RVRATVAATP VALPGGTQLS
LTVSVGLAEL APGESTAALL QRADAALYGA KRLGRNRVLL AH
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