Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3472 |
Symbol | |
ID | 7382006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3720738 |
End bp | 3721466 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643656792 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002554898 |
Protein GI | 222112634 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.871498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGTT TTCACTGCCC CCTGCCCCTG GCCGCTGATG CGCAGCTCAC GCTGCCGCCG ACGGCCGCGC GCCATGTGCA GGTGCTGCGC CTGCAGCCGG GCGACGCGGT CACGCTGTTC AACGGCGAGG GCGGCGAGTG GAGCGCCACC GTCACCCACA TGGGCCGCAG CGATGTGCAG GTGCAGGTCG GCAGCCACAG CGCCGTGGAG CGCGAGGCCG CGCGCGCCGT GCACCTGGTG GTGGGCATGC CCGCCAACGA GCGCATGGAC TGGCTGGTGG AAAAGGCCAC CGAGCTGGGT GCCGCGAGCA TCCAGCCGAT TGCCGCGGCG CGCAGCGTGC TCAAGCTGTC CGGCGAGCGC GCCGCCAAGC GCCAGCAGCA CTGGCAGGCG ATTGCCGTGG CGGCCTGCGA GCAATGCGGG CGCAACCGCG TGCCCTCCGT GCACGCGCCG CTGTCCCTGG CCGACTGGCT ACGCCAGCCC CCTGCCGACG CACTCGCCCC CGACGCCGCG CGCCTGCTGC TGTCGCTGCG CAGCGGCAGC CGCCCGCTGC GGGAGGCCGC AGCCGAGGCG GGTGCCGTCT GGGTGCTGCA CGGCCCCGAG GGCGGCCTGA CCGCGCAGGA GGAAGACGCC GCGCTGGCCC AGGGCTTTGC GCCGGCCAGC CTGGGCGCGC GCGTGCTGCG GGCGGAAACT GCCTCGGTGG CGGCACTGGC GCTGCTGGGG CTGGCCTGA
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Protein sequence | MPRFHCPLPL AADAQLTLPP TAARHVQVLR LQPGDAVTLF NGEGGEWSAT VTHMGRSDVQ VQVGSHSAVE REAARAVHLV VGMPANERMD WLVEKATELG AASIQPIAAA RSVLKLSGER AAKRQQHWQA IAVAACEQCG RNRVPSVHAP LSLADWLRQP PADALAPDAA RLLLSLRSGS RPLREAAAEA GAVWVLHGPE GGLTAQEEDA ALAQGFAPAS LGARVLRAET ASVAALALLG LA
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