| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3456 |
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| Symbol | |
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| ID | 7381990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3700674 |
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| End bp | 3702191 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643656776 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_002554882 |
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| Protein GI | 222112618 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.146595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCACG ACAAGAACGT CACCACCACC GTCGGCCACC TGATCGATGG CAAGCTCGTT
GCCGACACCG AGCGCACGCA GCCCGTGTTC AACCCTGCCA CCGGCCAATC GACCACCAGC
GTGGCGCTGG CCAGCCAGGC CACGGTGGAA GCCGCCATTG CCTCTGCCGA GGCCGCCTTC
CCCGCCTGGC GCAACACGCC GCCGCTCAAG CGCGCCCGCG TTTTAGCCAA GCTGAAAGTA
CTGCTCGAAG AAAACGCCGA CAAGATCGCC GCGATGATCA CCGCCGAACA CGGCAAGGTG
CTGGCGGATG CCCACGGCGA GCTGCAGCGC GGCATCGAGA ACGTGGAGTA CGCGAGCTAC
GCGCCCGAGC TGCTCAAGGG CGAGCACAGC CGCAACGTGG GCCCCGGCAT CGACAGCTGG
AGCGAGTTCC AGGCGCTGGG CGTCACGGCC GGCATCACGC CGTTCAACTT CCCGGCCATG
GTGCCGCTGT GGATGTGGCC CATGGCCGTG GCCTGCGGCA ACACCTTCGT GCTCAAGCCG
TCCGAGCGCG ACCCCAGCAG CACGCTGTTC ATCGCCCAGC TGGCGCTGGA GGCGGGCCTG
CCGCCCGGCG TGCTGAACGT GGTCAACGGC GACAAGCTGG CCGTCGATAC GCTGCTGCAA
GACCCGCGCG TGAAAGCCGT GAGCTTTGTG GGCTCCACCC CCATCGCCGA GTACATCTAC
GCCGAAGGCT GCAAGCACGG CAAGCGCGTG CAGGCCCTGG GCGGCGCCAA GAACCATGCG
GTGCTCATGC CCGACGCGGA CGTGGACAAC GCCGTGAGCG CGCTGATGGG TGCCGCTTAT
GGATCGTGCG GCGAACGCTG CATGGCGATC CCGCTGCTGG TGGCCGTGGG CGACGAAGTG
GGCGACGCCG TGATTGCGGG CCTGAAGGCC GAGATCGCCA AGATGAGGGT CGGCCCCGGC
ACCGACAACA GCAACGACAT GGGCCCGCTG GTGACCAAGC CGCACTTTGA AAAGGTGAAG
GCCTATGTGG ACAGCGGCGT GCAGGAGGGC GCCACGCTGG TGGTGGACGG CCGTGGCGTG
CAAGTGGCGG GCCACGAGGA AGGCTACTTC CTGGGCGCCT GCCTGTTTGA CAACGTCAAG
CCCGGCATGA AGATCTACCA GGAAGAAATC TTCGGCCCCG TGCTCGGCGT GGTGCGCGTG
AAGACGCTGC AGGAAGCCAT GCAGCTCATC AACGACCACG AATACGGCAA CGGCACCTGC
ATCTTCACGC GCGACGGCGA AGCCGCGCGC TACTTCACCG ACCACATCCA GGTCGGCATG
GTGGGCGTGA ACGTGCCGCT GCCCGTGCCG GTGGCGTACC ACTCGTTCGG CGGCTGGAAG
CGCAGCCTGT TCGGCGACCT GCACGCCTAC GGGCCGGACG CCGTGCGCTT CTACACCAAG
CGCAAGACGA TCACCCAGCG CTGGCCCTCG GCCGGCGTGC GCGAGGGGGC GGTGTTCAGC
TTCCCGAGCA GCCGCTGA
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| Protein sequence | MHHDKNVTTT VGHLIDGKLV ADTERTQPVF NPATGQSTTS VALASQATVE AAIASAEAAF
PAWRNTPPLK RARVLAKLKV LLEENADKIA AMITAEHGKV LADAHGELQR GIENVEYASY
APELLKGEHS RNVGPGIDSW SEFQALGVTA GITPFNFPAM VPLWMWPMAV ACGNTFVLKP
SERDPSSTLF IAQLALEAGL PPGVLNVVNG DKLAVDTLLQ DPRVKAVSFV GSTPIAEYIY
AEGCKHGKRV QALGGAKNHA VLMPDADVDN AVSALMGAAY GSCGERCMAI PLLVAVGDEV
GDAVIAGLKA EIAKMRVGPG TDNSNDMGPL VTKPHFEKVK AYVDSGVQEG ATLVVDGRGV
QVAGHEEGYF LGACLFDNVK PGMKIYQEEI FGPVLGVVRV KTLQEAMQLI NDHEYGNGTC
IFTRDGEAAR YFTDHIQVGM VGVNVPLPVP VAYHSFGGWK RSLFGDLHAY GPDAVRFYTK
RKTITQRWPS AGVREGAVFS FPSSR
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