| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3448 |
|---|
| Symbol | |
|---|
| ID | 7381982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3692574 |
|---|
| End bp | 3694070 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643656768 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_002554874 |
|---|
| Protein GI | 222112610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.707869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA GCGGCACCCA GCGGACCTAC CGCGCGCCCT GCCCGGGCTG CGGCGCGCCG
GTCGAATTCA AGAGCGCGCA ATCCACCCAT GCCATCTGCG CCTACTGCCA CAGCACCGTG
GTGCGCAGCG GCGAGGTGCT GCAGCGCCTG GGCCGCATGG CCGAGGTCTT CGACGACCAC
AGCCCGCTGC AGCTCATGGC CAGCGGACGC ATCGCGCTGG ACGGCCAGAC GCTGCCTTTC
ACGCTGATCG GCCGCCTGCA ATACCAGGGC GAGGAAGGCC GCTGGACCGA GTGGGTTGCC
TTCTTGCAGG ACGGCAGCAC CGCCACGCTC AGCGAGGACA ACGGCGCCTA TGTCTTCACC
CGCCCGGCCA CGCTGGGGCG GGAATTGCCC GAAGCCGAGC GCTTTCGCGT CGGCATGACC
ACGGCCGTGG CCGGCCAGCC GTTCAGCGTG GCGGCCAATG TGCGCGCACA ACTCGTCGCG
GCCGAGGGCG AGGTGCCGAA GCTGCCGCCG CTGGGCACGC CGTTCCAGGT GGTGGAGCTG
CGCTCGGCCG ACGGCGAGGT GCTCTCCATC GACTACGGCA CCCAGCCGCC CCAGGTGCAG
CGCGGCCGGG CGGTGCGGCT GGAGGATCTG CAGTTCCAGG GCCTGAAGGA CGAGTCCGCC
AAGGAGGAAA AGGGCCGCCA GTTCAGTTGC CCCCATTGCG GCGCGCCGGT GCAGGTGCAG
CTGTCCAGCA CCAAAAGCTG TACCTGCCCG TCGTGCCACA GCCTGATCGA CTTGAGCGCG
GGTTTGGGTG GCGAGCTGCG CCACGCCGCA CAGTACGAAC CGGTGCAGCC GCTGATCCCG
CTGGGCAGCG TGGGCCAGTT CGAGGGCGCG CCATGGCAGG TGGTGGGCTT TCAGCACCGC
ACGGGCGTGG AGCCCGGGGA TGACGAGCAC TTCGGCTGGG AGGAATACCT GCTGTACCAC
CGCCAGCGGG GCTTCCTGTT CCTGGTGGAC GCCAGCGATG GCTGGAGCCT GGTGCGCCCC
GCCACTGGCG CGCCGCAGCA CAAGCCGGGC GCGCCCACCG CCACCTACCT GGGCACGCAG
TACCGCCTGA CCTCCACCTA CCAGGCCGAG ACCAACTATG TGGCGGGCGA GTTCTACTGG
CCCGTGGAGC GCGGCCAAAA GACCAGCAAC AGCGACTTTG CCGCCGTGAA CGGCAAGGGC
CTGCTGTCGC GCGAGCAGTC GCGCAGCGAG GTCACCTGGT CGCACGGCCA GCGCATGGAC
TCCAGCGCCG TCGCCCAGGC CTTCAAGCTG GGCGACAAGG CGGCGCTTTT CCGCCGCCAG
GACGCGGGGC CCGTTGCCGC GGGCTCTGGC ATCGGCTGCG GCACGGTGAT CGTGATCCTC
ATCGTGCTGA TCATTCTGCT GGTGCTCATG AGCAACTGCT CGGGCTCTTC AGGCGGGTAC
TACCGCAGCT CGGGCGGCTC GTTCGGTGGC TACAGCACGG GCGGCGGCCA CAAGTGA
|
|---|
| Protein sequence | MADSGTQRTY RAPCPGCGAP VEFKSAQSTH AICAYCHSTV VRSGEVLQRL GRMAEVFDDH
SPLQLMASGR IALDGQTLPF TLIGRLQYQG EEGRWTEWVA FLQDGSTATL SEDNGAYVFT
RPATLGRELP EAERFRVGMT TAVAGQPFSV AANVRAQLVA AEGEVPKLPP LGTPFQVVEL
RSADGEVLSI DYGTQPPQVQ RGRAVRLEDL QFQGLKDESA KEEKGRQFSC PHCGAPVQVQ
LSSTKSCTCP SCHSLIDLSA GLGGELRHAA QYEPVQPLIP LGSVGQFEGA PWQVVGFQHR
TGVEPGDDEH FGWEEYLLYH RQRGFLFLVD ASDGWSLVRP ATGAPQHKPG APTATYLGTQ
YRLTSTYQAE TNYVAGEFYW PVERGQKTSN SDFAAVNGKG LLSREQSRSE VTWSHGQRMD
SSAVAQAFKL GDKAALFRRQ DAGPVAAGSG IGCGTVIVIL IVLIILLVLM SNCSGSSGGY
YRSSGGSFGG YSTGGGHK
|
|---|
| |