Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3437 |
Symbol | |
ID | 7381971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3681533 |
End bp | 3682516 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643656758 |
Product | ApbE family lipoprotein |
Protein accession | YP_002554864 |
Protein GI | 222112600 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0181711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGA CCTGTTCTGA CCCGCGGCGG CTGGCGCTGC ATGGCCCCAC CATGGGCACG CGCTGGTCGG TTACCTGCGA TGCGGCGCCG GACACCGATG TGCAGGCGCT GCAAACCGCG CTGGCAGCCG CCGTGCAACA GGTGGATGCG CAGATGTCGC CCTGGCTGCC GGGCAGCGAT CTCAACCGCT TGAACCACGC CCCCGTGGGG GCCTGGGTCA CGCTGCCCGC TGAAATCCTG GAGGTATTGG TTTGCGCGCT GGACGTCTGC CGCCTGAGTG CGGGCGCCTT CGACCCGGCC GCGGGTGCGC TGGTCGATGC CTGGGGCTTT GGAGCGGTGC GCGACGCTCC CGACGCCGAG GCGATCCGCA CAGCCACCAG CGCGGCACCT GTCGCGCGCA CCCCCACCTA CGAGGCGCTA GAACTGGACA GCGGCATGCT GCGCGCCCGC AAGCACGCAC CCATGCACCT GGACCTGTGC GGGATCGCCA AGGGCTACGC CGTGGACCGC ATGGCCGACG TACTGCGGCA GAACGGCGTA CCGCACGCCC TAGTGGCGCT GGACGGCGAG CTGCGCGCCG TGGGCGGCCA GGCCGATGGC CAACCCTGGG CCGTCGCGGT GGAAAGCCCC GAGACCTGCC GCCGCGCCGT GCACAGCGTG GTCGAACTGC AGGACCTGGC TGTGGCGACC TCGGGCGACT ACCGGCACTA TCTCCAGGTA GGCGACGCAC GGCTGGCGCA CACCATGGAC ACGCGCCGTG GCGCCCCCGT GCGCAACGAA GTCGCCTCTG TCACCGTGTT GGCACGCCAG TGCATGCACG CCGACGCCTG GGCCACCGCG CTGCTGGTGG CCGGCCCTGG CGAAGGGCTG GCGCTGGCCC AGCGCATGGG GCTGGAGGCG CTGTGGATGC TGAGGCGCGG CAACGGACTG GTCACGCTGG GGCTGGGCCG GTTCAGCTCG GGCGCACCGG CGAGCGGGGC ATGA
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Protein sequence | MPKTCSDPRR LALHGPTMGT RWSVTCDAAP DTDVQALQTA LAAAVQQVDA QMSPWLPGSD LNRLNHAPVG AWVTLPAEIL EVLVCALDVC RLSAGAFDPA AGALVDAWGF GAVRDAPDAE AIRTATSAAP VARTPTYEAL ELDSGMLRAR KHAPMHLDLC GIAKGYAVDR MADVLRQNGV PHALVALDGE LRAVGGQADG QPWAVAVESP ETCRRAVHSV VELQDLAVAT SGDYRHYLQV GDARLAHTMD TRRGAPVRNE VASVTVLARQ CMHADAWATA LLVAGPGEGL ALAQRMGLEA LWMLRRGNGL VTLGLGRFSS GAPASGA
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