| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3434 |
|---|
| Symbol | |
|---|
| ID | 7381968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3678420 |
|---|
| End bp | 3678851 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643656755 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002554861 |
|---|
| Protein GI | 222112597 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5591] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.166589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACC CGACCCCGTT GCTGGCCCTG TGCCTGGCCC TGGCAGCAGC CCCTGCGCTG
GCGGACGATG ACTGCGAGGC CCCCGTGCAG CACTGGCAGT CACGCGACGC CGTGATGCGG
CACGCGGCCG CTCAGGGCTG GCAGGTGCAG CGCATCAAGA TCGACGACGG CTGCTACGAA
GTGCGCGGCC GCGACGCCCA GGGCCGCAGC TTCAAGGCCA AGCTGGACCC CCAGACGCTG
CGCGTGGTGA AGATGAAGCT GCGCGGCGAC GATGACGAAG GGCATGAGCG CGAGCGCGAA
CGCCGGCGCG ACCGTGGCCC CGCCCAGGAT GCCGCCCCAT CTGCCGCCCC GTCCGCCGCG
CCCGCACCGG CAGCCCCGGC CCACAGCCCC GTGCTGACCC CCGGCACCAC GCCGCGCGGC
CAGATCGAAT AA
|
|---|
| Protein sequence | MKYPTPLLAL CLALAAAPAL ADDDCEAPVQ HWQSRDAVMR HAAAQGWQVQ RIKIDDGCYE
VRGRDAQGRS FKAKLDPQTL RVVKMKLRGD DDEGHERERE RRRDRGPAQD AAPSAAPSAA
PAPAAPAHSP VLTPGTTPRG QIE
|
|---|
| |