| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3413 |
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| Symbol | mnmA |
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| ID | 7383652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3655301 |
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| End bp | 3656413 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656734 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002554840 |
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| Protein GI | 222112576 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.599463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAC ACCGGGTCGT GGTGGGCCTG TCGGGGGGCG TGGACTCCGC CGTCACGGCG
CACCTTCTCA AGCAACAGGG CCACGAGGTG GTCGGCATCT TCATGAAGAA CTGGGAAGAT
GACGACGACA GCGAGTTCTG CTCCAGCCGC CAGGACTTCC TGGACGCGGC CAGCGTGGCC
GACGTGATCG GCATCGAGAT CGAGCACGTC AACTTTGCCG CCGAGTACAA GGACCGGGTG
TTCGCCGAGT TCCTGCGCGA GTACCAGGCC GGCCGTACGC CCAACCCGGA CGTGCTGTGC
AACGCCGAGA TCAAGTTCAA GGCCTTCCTG GACCACGCCA TGCGCCTGGG CGCCGAGAAG
ATCGCCACCG GCCACTACGC GCGCGTGCGG CAGAACCCGG CCACGGGCCT GTTCGAGCTG
CTCAAGGGGT TGGACCCGTC CAAGGACCAG AGCTACTTTC TGCACCGCCT GAACCAGGCG
CAGCTGTCCA AGACGCTGTT CCCCGTGGGC GACCTGCACA AGACCGAGGT GCGCCGCATC
GCTGCCGACA TCGGCCTGCC CAACGCCAAG AAGAAGGACT CCACCGGCAT CTGCTTCATC
GGCGAGCGGC CGTTCCGCGA GTTCCTCAAC CGCTACATCC AGCATGCGCC CGGCCCCATC
CTGGACGACC GCGGGCGCAA GCTGGGCCGC CACGTGGGCC TGTCGTTCTA CACGCTGGGC
CAGCGGCAGG GCTTGGGGAT CGGCGGTGTC AAGGAGAAAG GCGCGCAACG CGGCGCGGGC
GACCATGCGC CCTGGTTCGT GGCCCGCAAG GAGCTGGAGA CGAACACCCT GCGCGTGGTG
CAGGGCCACG AGCACCCGTG GCTGCTGTCG CACCGCCTGG ATGCGCAGGA CGCGAGCTGG
ATTGCCGGCC ATCCGCCCGC AGCAGGCGCC TGCGCCGCCA AGACGCGTTA CCGTCAGCAG
GACGCCGCCT GCACGGTGCT GGCCGCACAG GGCGACGCCT TCAGCCTGCA GTTCCCTGAG
GCGCAGTGGG CTGTGACGCC GGGCCAGTCG GCCGTGCTGT ACGACGGTGA GGTGTGCCTG
GGCGGTGGGG TGATCGCGGC CGTGAACGGC TGA
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| Protein sequence | MTKHRVVVGL SGGVDSAVTA HLLKQQGHEV VGIFMKNWED DDDSEFCSSR QDFLDAASVA
DVIGIEIEHV NFAAEYKDRV FAEFLREYQA GRTPNPDVLC NAEIKFKAFL DHAMRLGAEK
IATGHYARVR QNPATGLFEL LKGLDPSKDQ SYFLHRLNQA QLSKTLFPVG DLHKTEVRRI
AADIGLPNAK KKDSTGICFI GERPFREFLN RYIQHAPGPI LDDRGRKLGR HVGLSFYTLG
QRQGLGIGGV KEKGAQRGAG DHAPWFVARK ELETNTLRVV QGHEHPWLLS HRLDAQDASW
IAGHPPAAGA CAAKTRYRQQ DAACTVLAAQ GDAFSLQFPE AQWAVTPGQS AVLYDGEVCL
GGGVIAAVNG
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