Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3408 |
Symbol | |
ID | 7383647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3646324 |
End bp | 3647817 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643656729 |
Product | sodium/proline symporter |
Protein accession | YP_002554835 |
Protein GI | 222112571 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.704891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC TAGACCCGAC CGTCATCACC TTCGGCATCT ACCTGCTGGC CATGCTGTTC ATCGGCTGGC TGGGCTACCG CGCGACGACC GACCTCTCCG ACTACATCCT GGGCGGGCGC AGCCTGGGCA GCTTCGTCAC TGCGCTGTCG GCCGGCGCGT CCGACATGAG CGGCTGGCTG CTCATGGGCC TGCCCGGCGC GGTGTACCTG AGCGGACTGA GCGAGGCGTG GATCGCCATC GGCCTGACCA TCGGCGCCTA CCTCAACTGG CGCCTCGTGG CCGCGCGGCT GCGCCTGTAC ACCGAGCGCA CCAACAACGC CCTCACGTTG CCCGACTACC TGGCCTCGCG CTTCGAGGAC GGCGCGAACG TGCTGCGCCT GGTGACCACG GCGGTGATCC TGGTGTTCTT CACCATCTAC TGCGCCTCGG GCGTGGTGGC GGGTGCGCGC CTGTTCGAGA GCATGTTCGG CCTGCCCTAC CAGACAGCCC TGTGGGTCGG GGCGCTGTGC ACCATCGCCT ACGTGTTCAT CGGTGGCTTC CTGGCGGTGA GCTGGACGGA CACCATCCAG GCCTCGCTGA TGATCACCGC GCTGATCCTG GCGCCCGTGG TGGCCTACTT CGCCGTCACC GGCGAACTGC AGGCGGGCCA AAGCCTCACC GAGATGATCG GTGCGCAGAA GCTCGACCTG ATGCACAACG CCAGCGTGAT CGGCGTGGTC TCGCTCATGG CCTGGGGCCT GGGCTACTTC GGCCAGCCGC ACATTCTGGT GCGTTTCATG GCGGCGGATT CGGTGGCCTC CATCCCGCGC GCGCGCCGCA TCGGCATGAC CTGGATGGTG CTGTGCCTGG GCGGCGCGGT GGCTGTGGGC CTGGTCGGCA TCCCGTACTT CGCGGTGCAC ACGCAGCAGG CCGCCGGCGT GCAGGCCAAT GCCGAGACGG TGTTCATCGA GATCGCGCGC CAGCTCTTCA ACCCCTGGAT CGCCGGCCTG CTGCTGGCGG CCATTCTGGC GGCGGTGATG AGCACGCTGT CGTGCCAGCT GCTGGTGTGC TCCAGCGCGC TGACCGAGGA CATCTACCGC GTGTTCCTGC GCAAGAACGC CACGCAGCGC GAGCTGGTGT GGGTGGGCCG AGCGATGGTG TTCGCCATCG CCGTGGTGGC GATCGTCATC GCGGGCAACC CCAACAGCCG CGTGCTGTCG ATGGTGAGCT ACGCCTGGGC GGGCTTCGGC GCGGCATTCG GGCCAGTCAT CCTGCTGTCG CTGTTCTGGC GCGGCATGAC GCGCAACGGC GCGCTGGCCG GCATCGTGGT CGGTGCCGTG ACGGTGGTGG TGTGGAAGCA GGGCGGCTGG CTGGGGCTGT ACGAGATCGT GCCCGGCTTC GTTCTGGGCG CGCTGGCCGT GGTGCTGGTG AGCAAGCTGG GCAAGCAACC CTCGCCCGCC ATGCTGCAGC GCCACGACGC GGTGGACGCC GAGATGGCGC GTCTGCAAGC CTGA
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Protein sequence | MNLLDPTVIT FGIYLLAMLF IGWLGYRATT DLSDYILGGR SLGSFVTALS AGASDMSGWL LMGLPGAVYL SGLSEAWIAI GLTIGAYLNW RLVAARLRLY TERTNNALTL PDYLASRFED GANVLRLVTT AVILVFFTIY CASGVVAGAR LFESMFGLPY QTALWVGALC TIAYVFIGGF LAVSWTDTIQ ASLMITALIL APVVAYFAVT GELQAGQSLT EMIGAQKLDL MHNASVIGVV SLMAWGLGYF GQPHILVRFM AADSVASIPR ARRIGMTWMV LCLGGAVAVG LVGIPYFAVH TQQAAGVQAN AETVFIEIAR QLFNPWIAGL LLAAILAAVM STLSCQLLVC SSALTEDIYR VFLRKNATQR ELVWVGRAMV FAIAVVAIVI AGNPNSRVLS MVSYAWAGFG AAFGPVILLS LFWRGMTRNG ALAGIVVGAV TVVVWKQGGW LGLYEIVPGF VLGALAVVLV SKLGKQPSPA MLQRHDAVDA EMARLQA
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