| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3397 |
|---|
| Symbol | |
|---|
| ID | 7383636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3635208 |
|---|
| End bp | 3635723 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643656718 |
|---|
| Product | putative lipoprotein transmembrane |
|---|
| Protein accession | YP_002554824 |
|---|
| Protein GI | 222112560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.504524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC TGCCGGCGCA CGCAACCGCA CCGCGCCGGC TCCGCTGGAG CGCACTGCTG
CTGGCTGTTT TTTTGGCGGC CTGCGCCGTA CCCGAATGGC AGAAAGCAGG CACGCCGCGT
GCGGACATCG AGCGCACCAT GGGCGCACCC ACGCTGACCG TAATGCTCCC TGAAGGCGGA
GAACGGCTGG TCTACAGCCG CCAGCCCGCA GGCCAACAGG TCTACCACCT CGACTTTGAC
GCCCGGCAAC GCCTGGTGCG GGTGGAGCAG GTACTGACGC TGGAGCACTT CCATGCGCTG
CGCAATGGCG TCGATACGCG CGCAGCCGTG CGACGCACCT TCGGCCCGCC TGCGCTGGTG
GAGAAGGTGG CGCGCTTCAA TGGCGATATC TGGACCTACC GCTTTCGTGA CAATGGAGAG
CCCCGCCAGG CCCATGTGCA CATCGACCCA GCGGGCGTCG TGCAGCGCGT GATGTTCACG
GACGAGCGGC TGAACGACAA CGACCCCTTT CACTGA
|
|---|
| Protein sequence | MTPLPAHATA PRRLRWSALL LAVFLAACAV PEWQKAGTPR ADIERTMGAP TLTVMLPEGG
ERLVYSRQPA GQQVYHLDFD ARQRLVRVEQ VLTLEHFHAL RNGVDTRAAV RRTFGPPALV
EKVARFNGDI WTYRFRDNGE PRQAHVHIDP AGVVQRVMFT DERLNDNDPF H
|
|---|
| |