| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3366 |
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| Symbol | |
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| ID | 7383605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3597790 |
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| End bp | 3599940 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656687 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002554793 |
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| Protein GI | 222112529 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGCA CCGTGGAGCA CGGCGGACCA GCGCGCGGAC GGGACAGGGG TGCTGCGGGC
CGGCAGCAGG GCCCGCAGTC GCTGCTGCCC CCTTCGGCGC CCGAAGACGG GCCCCAGGAC
AAGGTACCCC GCCGGTGGCG CCGCTGGGTG GGTGCGTGGC GGCGCTGGTC CCTGTGGACG
CTGCTGGTGG CGCTGGTGGC GGGCATGCTG GTCACCCAGG TATGGCTGGC TGGCCGCTAC
GAGGCCAGCC AGGTGCAAAG CCGCCTAGAA CGCGACACTG CCGACGCCGT AGCCGACATC
CGCAACGCCT TCGCGCACAA CCTGCAGAAC CTGCAGGCGC TGCAGGCAGG CGACCCCGAC
CTGGCCGCGT GGGAGGCGCG CGCGGCCGAG CTGCTGAGCA CGCGCCGCGA GCTGGTGCGC
ATCGAATGGC GCGACACGCA GCTGCTGCTG CGCGCACATG CGGAGTCGCC CTATCGCCCC
CTGCCGTGGG ACGCCACCAC GCGCAGCGGC ACGCATTCGG AGACCATGCT GGCCTGTACC
AACGCTCGGC GCATCACCGG CCCGTCGTAC TCCAGCAGCT ATTTCCAGCC CCTGCCCGAC
GGCATGGGCG CCGAGATGAT GGAGGTCTGC CTGCCGTTGA TCCAGGACGG ACGCGTGCGC
GGCTTCCTGG TTGCCACCTA CGCGCTGCAG ACCGTGCTGC AGGATTTGGT GGCGCCCAGC
CTGCAGCGCA CGCAGGAGGT TTCGTTCACC GAGGCCGACG GCACGCGGCT GGCGCTGGTG
GGCGCGCTGC GCCGCGGCTC GCGCATGTTC ACGGCGCAGC AGCTGTTCGA CCTGCCGGGC
AACACCCTGG TGCTGCGCAT GGACGGCTGG CACGCCGCGC CCAGCGTGTT TCCCAACGTC
CTCACGGCTC TGGTCACGGC CATGTCGATC GCGCTGGTGT CGGTGCTGGT GGTGCTGGTG
CGCGACAACC GGCGCCGCCT GCGCGCCGAG CGCGACCTGG GCGACGCGCT GGCCTTTCGC
AAGGCGATGG AGGATTCGCT GGTCACGGGC CTGCGCGCGC GGGATCTCAA CGGCCGCATC
ACCTATGTGA ACCCGGCGTT CTGCGACATG GTGGGCTTTC CCGCATCCGA GTTGGTGGGC
CAGACGTCGC CGCTGCCCTA CTGGCCGCCC GAGCACGCGC AGGAATATGC GGAGCGGCAG
GTGGTGCGCA TGTCGGGCCG GCTCGACCCG CCGCGCGAAG GGTACGAATC CACCTTCATG
CGCAAGGACG GCACGCGCTT TCCCGTCATG ATCTACGAAG CGCCGTTGAT CAACGCACAG
GGCCTGCACA CGGGGTGGAT GGGCTCGTTT CTCGACGTGA GCGAGCAGCG GCGCGTGGAG
GAGTTGTCGC GCACCTCGCA GGAGCGCCTG CAGGCCACGG CACGCCTGGC CACGGTGGGG
GAGATGGCAT CGCTGCTGAG CCATGAACTG AACCAGCCGC TGGCGGCCAT CTCCAGCTAT
GCCAACGGCT CGCTTAACCT GCTGGAGCCG GCGCCGGGCG CCGAGTTGCC GTCGCCCCAG
GACCTGCAGG ACGTGCGCGT GGGCGTGCAG CGCATTGCAG CGCAGGCCGA GCGCGCGGGC
CGCGTGATCA AGAGCGTGCA CGACTTCGTG CGGCGCCGCG ACCAGACCCG CGAGCCGGTC
ACCGCGCAGG ACCTGTTCGA TGCGGTGCTG CCCATCATCC GGCTGCAGGC GCGCAAGCTG
GGCGTGCGCG TGGTGCTGTC GATCGAGGAC GGCCTGCCGC CCGCGCTGTG CGACCGCACC
ATGGTCGAGC AGGTGCTGTT GAACCTCACG CGCAACGCCA TGCAGTCCAT GGACGACCCG
CAGATCCATC CGCGCATCCT CGATCTGCGG GTGCGGCGCG CGGCCTCCAA TGCGTCCAAC
AGCTGGCTGG AGTTCTCGGT GGCCGACATG GGCATGGGCA TTCCGGAGGA CGTGGCCGAG
AGACTGTTCA CGCCGTTCTA CACCACCCGC GTCGAAGGCA TGGGCCTGGG GCTGAGCCTG
TGCCGCACCG TGGTGGAGCA GCATGGGGGC TTTCTGGACC ATGCGGCGCG TGAGCCGCGT
GGTACGGTAT TCACTTTCAC CCTGCCCGCA TTTCAGAAAG CCGACCCCTG A
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| Protein sequence | MGGTVEHGGP ARGRDRGAAG RQQGPQSLLP PSAPEDGPQD KVPRRWRRWV GAWRRWSLWT
LLVALVAGML VTQVWLAGRY EASQVQSRLE RDTADAVADI RNAFAHNLQN LQALQAGDPD
LAAWEARAAE LLSTRRELVR IEWRDTQLLL RAHAESPYRP LPWDATTRSG THSETMLACT
NARRITGPSY SSSYFQPLPD GMGAEMMEVC LPLIQDGRVR GFLVATYALQ TVLQDLVAPS
LQRTQEVSFT EADGTRLALV GALRRGSRMF TAQQLFDLPG NTLVLRMDGW HAAPSVFPNV
LTALVTAMSI ALVSVLVVLV RDNRRRLRAE RDLGDALAFR KAMEDSLVTG LRARDLNGRI
TYVNPAFCDM VGFPASELVG QTSPLPYWPP EHAQEYAERQ VVRMSGRLDP PREGYESTFM
RKDGTRFPVM IYEAPLINAQ GLHTGWMGSF LDVSEQRRVE ELSRTSQERL QATARLATVG
EMASLLSHEL NQPLAAISSY ANGSLNLLEP APGAELPSPQ DLQDVRVGVQ RIAAQAERAG
RVIKSVHDFV RRRDQTREPV TAQDLFDAVL PIIRLQARKL GVRVVLSIED GLPPALCDRT
MVEQVLLNLT RNAMQSMDDP QIHPRILDLR VRRAASNASN SWLEFSVADM GMGIPEDVAE
RLFTPFYTTR VEGMGLGLSL CRTVVEQHGG FLDHAAREPR GTVFTFTLPA FQKADP
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