| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3354 |
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| Symbol | secF |
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| ID | 7383593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3581206 |
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| End bp | 3582159 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643656675 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002554781 |
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| Protein GI | 222112517 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTTT TCCGCATCAA AAAAGACATC CCGTTCATGA AGTACGCGTT GGTGCTCAAC
GCGGTGTCTT TCATCACTTT CGCGCTCGCG GTGTTCTTCC TGGTCACGCG GGGCCTGCAC
CTGTCGGTGG AGTTCACGGG TGGCACCGTC ATGGAGGTGG CCTACACGCA GACAGCCGAC
ATCGGCAAGG TGCGCGACAC CGTCGCGGGC CTGGGCTATG CCGACGTGGT GGTGCAGAAC
TTCGGCACCT CGCGCGACGT GATGGTCCGC CTGCCCGTGC AAAAGGGCGT CACCTCGGCC
CAGCAAAGCG AGCAGGTGCT GAGCGCGTTG AAGGCGCAGG ACCCCGAGGT CACGCTGCGG
CGCACCGAGT TCGTGGGCCC GCAGGTGGGC GAAGAACTGG TGCATGGCGG CCTGATGGCG
CTGGGCATGG TGGTGCTGGG CATCGTCATC TACCTGGCCT TCCGCTTCGA GTGGAAGTTC
GGCGTGGCAG CGGTGATCGC CAACCTGCAC GACGTGGTCA TCATTCTGGG CTTCTTTGCG
TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCCGGCG TGCTGGCCGT GCTGGGCTAT
TCGGTGAACG AGTCGGTGGT GATCTTCGAC CGTATCCGCG AGGCCTTCCG CAAGTTCCGC
AAGCTCAATA CGCATGAGGT GATCGACCAC GCCATCACCT CCACCATGAG CCGCACCATC
ATCACCCACG CCTCCACCGA GGCCATGGTG CTGTCCATGT TCTTCTTCGG GGGCCCCAGC
CTGCACTACT TCGCACTGGC GCTGACCATC GGCATCCTGT TCGGCATCTA CTCGTCGGTG
TTCGTTGCCG CGGCCATCGC TATGTGGCTG GGCGTCAAGC GCGAAGACCT GGTCAAGGCG
CCGACCCGCA AGGAAGGCGA CCCGGCCGAC CCGAACTCCG GCGCCGTGGT CTGA
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| Protein sequence | MEFFRIKKDI PFMKYALVLN AVSFITFALA VFFLVTRGLH LSVEFTGGTV MEVAYTQTAD
IGKVRDTVAG LGYADVVVQN FGTSRDVMVR LPVQKGVTSA QQSEQVLSAL KAQDPEVTLR
RTEFVGPQVG EELVHGGLMA LGMVVLGIVI YLAFRFEWKF GVAAVIANLH DVVIILGFFA
FFQWEFSLSV LAGVLAVLGY SVNESVVIFD RIREAFRKFR KLNTHEVIDH AITSTMSRTI
ITHASTEAMV LSMFFFGGPS LHYFALALTI GILFGIYSSV FVAAAIAMWL GVKREDLVKA
PTRKEGDPAD PNSGAVV
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