| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3347 |
|---|
| Symbol | |
|---|
| ID | 7383586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3572961 |
|---|
| End bp | 3573887 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643656668 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002554774 |
|---|
| Protein GI | 222112510 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0221177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGC GCCGCCTTCA CCCGCCGCTG CACCTGCTGC GGGCGTTCTG TACCGTGGCC
CGCTTCGGGG GCATCTCGCG CGCGGCCGAG GCACTGCACC TCACCCAGAG CGCGGTGAGC
AAGCAGGTGC AGGAGCTGGA GCGCTGGGTG GGCGTTCCGC TGTTCGAGCG CAGCCGCAAG
CGCCTGTCGC TCACACCCGC CGGGGAGCGC TACGAAAAGG CCGTGAGCGC CCTGCTCGCC
CGCTTGGAGG CGGCCACGCT GGAGCTGATC ACCAGCGGCG ACGAGGGCGG CGCGCTGCAC
CTGTCGGTGC TGCCCACGCT GGCCGCCAAG TGGCTGATTC CGCGCCTGCC GCAGCTGCGT
GCGCAGCACC CGCAGATCAC GCTGCATTTC GTGCCCTACG TGCACGGCTA CGACTTTGCC
GACCCCGAGC TGGACTGCTC CATCCTGTTC GGCGACGGGC ACTGGCCGGG CGCACGCGCG
CACTACCTGA CGGGCAACGA CGTGGCCCTG ATCGGCCCGC GCGCCGGGCT GGCCGGCGCG
CCGCCCCTGC ACAGCCCGCA GGACGTGGCA CGCCACACGC TGCTGCGCCA CGTGAGCGTG
CCCGGTGCCT GGCAGCACTG GGCCGAGGCG CACGGCGTGA ACGGCCTGGA CCCGCTGGCC
GGCCCACAGT TCGACCAGTT CCAGACCATC ATCCGCGCGG TGTCGGTGGG CATGGGCCTG
GCCCTGGTGC CGCGCTGCCT GGTGCAGGAC GAGATTGCCG CCGGCACCGT CACCGAGCCG
CTGCCCGGCG GCGGCTACAC GAGCGACCTG GGCTACTGGC TGTGCTACCC CGAGTCGCGT
GCGCAGCTGG CCACGCTGGT GCGCTTTCGC GACTGGCTGC TGGCGCTGGC GGACCCCGCA
GCGGGCACGG CCGCACCGGC TGCTTGA
|
|---|
| Protein sequence | MILRRLHPPL HLLRAFCTVA RFGGISRAAE ALHLTQSAVS KQVQELERWV GVPLFERSRK
RLSLTPAGER YEKAVSALLA RLEAATLELI TSGDEGGALH LSVLPTLAAK WLIPRLPQLR
AQHPQITLHF VPYVHGYDFA DPELDCSILF GDGHWPGARA HYLTGNDVAL IGPRAGLAGA
PPLHSPQDVA RHTLLRHVSV PGAWQHWAEA HGVNGLDPLA GPQFDQFQTI IRAVSVGMGL
ALVPRCLVQD EIAAGTVTEP LPGGGYTSDL GYWLCYPESR AQLATLVRFR DWLLALADPA
AGTAAPAA
|
|---|
| |