| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3321 |
|---|
| Symbol | |
|---|
| ID | 7385220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3547984 |
|---|
| End bp | 3548853 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643656644 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_002554750 |
|---|
| Protein GI | 222112486 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0186986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCA CCCCCTCCAG CGCACGCCCC AAGGCCGTGG TGAACCACCT GCCCGGTGGC
AGCACGTCCA CCGTGGAGCG CGCCATGCGC GTGCTGCGGG TGATGTCCGA GGGCGGCAAC
GCGCGCCTGA CCGACATTGC CGCCGCGGCC GAACTGGACA AGGCCACCAC GCTGCGCCTG
CTGGAGGTGA TGGTGCGCGA CGGCTTCGTC GCGCGCGATG CGCAGAGCAA GCAGTTCTCG
CTGGGGCCCG AACTCATGGT GCTGGGCGCG GCCGCGCTGC GGCGCTTTGA CCCGCGGCCG
CTGGCGCGCC CCAGCCTGCT GCGGCTGGTG GGCCAGTTCG AGGACAGCGT GGTGCTGTCC
ATCCCCAGCG GCGTGGAGTC GCTGTGCATC GACGTGGAGG AAGGCACCTA CCCCATCCGC
GCCAACTACC TGCGCGTGGG CAGCCGCCGC CCGCTGGGCG CCGGGGCCGG CAGCCTGGCG
CTGCTGGCCT GGATGCCCGA GGCCGAGCGC GAGGCGGCGC TGGAAATCCT CGCCAACCAG
ATGAGCCGCT ACCCGCGCAT CACGCCCGCG CTGCTGCGCG AGCGCATCGC CGACGCGCGC
GAACGCGGCC ACGTGGTGCT GCTGGACGTG GTGGTCGAGC GCATGGGCGG CATCGCCGTG
CCCGTGCTCG ACCCCGAGGG CCGCCCCGTG GCGGCCCTGA GCATTGCCGC GCTGAACGAG
CGCATCCTCG CGCGGGAAGC CGCCATGGCC CACGCGCTGA TGCGCGAATC CACCGTGTGC
CAGGTGCGCT GGTCCGAGGC CGTGCGCACC AGCCGCCGCC TGGCCGGCGC AGCCTCCCCC
TCAAGAACCC TCCCGGAGAC CCCGCGATGA
|
|---|
| Protein sequence | MPPTPSSARP KAVVNHLPGG STSTVERAMR VLRVMSEGGN ARLTDIAAAA ELDKATTLRL
LEVMVRDGFV ARDAQSKQFS LGPELMVLGA AALRRFDPRP LARPSLLRLV GQFEDSVVLS
IPSGVESLCI DVEEGTYPIR ANYLRVGSRR PLGAGAGSLA LLAWMPEAER EAALEILANQ
MSRYPRITPA LLRERIADAR ERGHVVLLDV VVERMGGIAV PVLDPEGRPV AALSIAALNE
RILAREAAMA HALMRESTVC QVRWSEAVRT SRRLAGAASP SRTLPETPR
|
|---|
| |