| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3315 |
|---|
| Symbol | |
|---|
| ID | 7385214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3542839 |
|---|
| End bp | 3543882 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643656638 |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_002554744 |
|---|
| Protein GI | 222112480 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC GCGCCAGTCC CGTCCTGCAA TCCCAGCCCC TGGGGCCGCT GTGGCCCACG
CTCGATCCGT TCCTGTTCTG CGCCCACCAT GACGACGCGT ACCCCGCCGG CAACGGCGCC
ATGGGCGTGC AGGCGGTGGC GCTGGAGGGG CGCCAGATGG GCAGCGATTT CAGCCGCAAG
GACGGCTTTT CGATGTACCA CGGCGAGCAC GTGCCCGGCT TTCCCGGCCA CCCGCACCGG
GGCTTCGAGA CCGTCACGCT GGTGCGCAAG GGCCTGATCG ACCATGCCGA CTCGCTGGGC
GCGGCCGCGC GCTTCGGTGG CGGCGACGTG CAGTGGGTCA CCGCCGGCGC GGGCATCATG
CATTCGGAGA TGTTCCCGCT GCTGAACACC GACGCGCCCA ACCCGCTGGA GCTGTTCCAG
ATCTGGCTGA ACCTGCCCGC GCGCCACAAG ATGGTGCAGC CGCACTTCAC CATGCTGTGG
AACGAACGCA TCCCGCGCCT GGAGCATGCC GACGCGGCCG GCCTGCGCAC CACGGTCACG
GTGGTCGCCG GCGCGCTGGA CGGCGCCGGT GCGCCGCTGC CGCCGCCCCC CGAGTCCTGG
GCCGCGCAGG CGGACGCCGA CGTCGCCATC TGGACGCTGC GCATGGAGCC CGGCGCGCAT
TGGACGCTGC CGGCGGCCCG CGGACAGGGC ACGCGCCGCA TGCTGTACTG GTTCGTGGGC
GAAGGGCTCT CGATCGCCGG CGAGCCGCAG GGCGGCCATG CCGCGCTGGA GGTGGTGGCC
GATCGGGCGC TGGAGCTGGT CAACACCGGC GGCGACACCG TGGAATGCCT GCTGCTGCAG
GGCCGTCCCA TCGGCGAGCC GGTGGTGCAG TACGGCCCGT TCGTGATGAA CACCCAGCAG
GAAATCATGC AGGCCATGCA GGACTTTCGC CGCACGCAGT TCGGCGGCTG GCCCTGGGAC
GCGAGCGACC CGGTGCACGG CAGCGCCCCC CGGCGCTTTG CGCGCCACCC GGGCAGCGCG
CAGGACGAGG TGCCGCAGGC CTGA
|
|---|
| Protein sequence | MNTRASPVLQ SQPLGPLWPT LDPFLFCAHH DDAYPAGNGA MGVQAVALEG RQMGSDFSRK
DGFSMYHGEH VPGFPGHPHR GFETVTLVRK GLIDHADSLG AAARFGGGDV QWVTAGAGIM
HSEMFPLLNT DAPNPLELFQ IWLNLPARHK MVQPHFTMLW NERIPRLEHA DAAGLRTTVT
VVAGALDGAG APLPPPPESW AAQADADVAI WTLRMEPGAH WTLPAARGQG TRRMLYWFVG
EGLSIAGEPQ GGHAALEVVA DRALELVNTG GDTVECLLLQ GRPIGEPVVQ YGPFVMNTQQ
EIMQAMQDFR RTQFGGWPWD ASDPVHGSAP RRFARHPGSA QDEVPQA
|
|---|
| |