| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3292 |
|---|
| Symbol | |
|---|
| ID | 7385191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3518373 |
|---|
| End bp | 3518867 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643656615 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002554721 |
|---|
| Protein GI | 222112457 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.42219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGG TGTTGCACAT CAACGCCGAC AAGTGCACCG GCTGCCTGCA GTGCGAGATG
GCCTGCTCTT TCGAGAATTA CGGCGTCTAC GCCACCGCCA AGTCGCGCAT CAAGGTGTTC
GACTTCCATA CCACGGGCAA GAAGGTGCCC TACACCTGCA CCCAGTGCGA CGAGGCCTGG
TGCCTGCACG CCTGCCCGGT GGAGGCGATC ACGGTGGACA AGCTGAGCGG CGCCAAGATC
GTGTCCGAGT CCACCTGCGT GGGCTGCAAG GTCTGCACCA TCGCCTGCCC CTTCGGCACC
GTGAACTACG TGGCCGACAC CGGCAAGGTG CAAAAGTGCG ACCTGTGCCA CGACCGCGCC
GAGGGCCCGG CCTGCGTGGA GGCCTGCCCG ACCACGGCCA TCACCTACAT CGACGCCAAC
TGGACCGGCC TGGAGCGCAT GAAGCAATGG GCCGACAAGC TGGGCAATCA AGCCAATCAG
CCCGCTGGCG CCTGA
|
|---|
| Protein sequence | MQKVLHINAD KCTGCLQCEM ACSFENYGVY ATAKSRIKVF DFHTTGKKVP YTCTQCDEAW
CLHACPVEAI TVDKLSGAKI VSESTCVGCK VCTIACPFGT VNYVADTGKV QKCDLCHDRA
EGPACVEACP TTAITYIDAN WTGLERMKQW ADKLGNQANQ PAGA
|
|---|
| |