| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3287 |
|---|
| Symbol | |
|---|
| ID | 7385186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3513368 |
|---|
| End bp | 3514507 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643656610 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_002554716 |
|---|
| Protein GI | 222112452 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.359649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC GCATGCAGTG GATAGCCGTT GCCGTTTCCG CCGCTGTTCT GGCGGCCTGC
GGGGGCGGCG GCGCCGACAC CACGCCCGCC ACGGCGGTCA CCGCAGTCAA GGTGATGGGT
GACAGCCTGG CGGACAGCGG CACCTTCGGG CTGAAGTTCA CGGTCCAGGG CACGGCCCCT
ACGGGCGCGG GCTCCACGGC CATCTGGCCC GAGCGCGTGG CCGCCAGTTA TGGCCGCACG
CTGTGCCCGC ACTATGTGTC CGCGGGGGGC AGCTTCAGCG CCAAGGCCGA CTGCACCAAC
TACGCGGTAG GCGGCGGGCG CATCAACAAC TTCACGGCGC CCACCTCGCC CGTGTCCATC
CTCCAACAGC TCAAGGATGC GGGCGCCGCC GGCTATGCCA CGGGTGACCT GGTGCTCATC
GACGGTGGCG GCAACGATGC GGCCGACCTG ATCGGCGCCT ACCTGGGGGC TTCAAGGGAC
GGCGGCAAGG CCTACGCGGC CCTGTTGGGC ACGGTACTGG ACGCCGCCAC GGTGAACAGC
CTGCTCGCGG GCGGCGCCAC CGGCATGGCC CAGGCAGGCG GCGCCTACAT GCAGGCGCTG
GCCACCCAGT TCGCGGCCAC GATCAAGGCG CAGACGCTGG ACAAGGGCGC GACGCGCGTG
GCCGTGCTGA ACATGCCTGG CGTGACGCTC ACGCCCAAGT TCCGCATGGT GCTGGCATCC
ATTTCCGCCG CCAACGGCGC GGCGGCCGCG GCCCAGGCGC AGACGCTGTT CGATGGCTGG
GTGCAGGCCT TCAACGCCAA GCTGGCCGCG GCGCTGGCGG GCGATGGGCG TCTCACCGTG
GTGGATTTCT ATGCCTCGTT CAAGGACCAG GCCGAGCATC CCGCGCAGTA CGCCTACACC
AACGTGACCA CGCCGGCCTG CCCCGCTACC GGCGTGGGCA GCGACGGCCT GCCCACCTAC
AGCTTCCCCA CCTGCACGGC GGCCGCGCTG TCGGCCATGA CGCCGCCGGC CGGCGCCACC
GGCGGGGCCG ATTGGTGGAA GAGCTACGGC TTTGCCGACA GCTTCCACCC CACGCCCTTC
GGCCACCAGC TGATGGGGCA ACTGGTGTCG CGTTCGCTGT CCCAGGCGGG CTGGCTCTGA
|
|---|
| Protein sequence | MKPRMQWIAV AVSAAVLAAC GGGGADTTPA TAVTAVKVMG DSLADSGTFG LKFTVQGTAP
TGAGSTAIWP ERVAASYGRT LCPHYVSAGG SFSAKADCTN YAVGGGRINN FTAPTSPVSI
LQQLKDAGAA GYATGDLVLI DGGGNDAADL IGAYLGASRD GGKAYAALLG TVLDAATVNS
LLAGGATGMA QAGGAYMQAL ATQFAATIKA QTLDKGATRV AVLNMPGVTL TPKFRMVLAS
ISAANGAAAA AQAQTLFDGW VQAFNAKLAA ALAGDGRLTV VDFYASFKDQ AEHPAQYAYT
NVTTPACPAT GVGSDGLPTY SFPTCTAAAL SAMTPPAGAT GGADWWKSYG FADSFHPTPF
GHQLMGQLVS RSLSQAGWL
|
|---|
| |