| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3270 |
|---|
| Symbol | |
|---|
| ID | 7385169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3498058 |
|---|
| End bp | 3498879 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643656593 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_002554699 |
|---|
| Protein GI | 222112435 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT CCTCCTCCGC TCCCCGCCGC GTGGCCGTGG CCGGCGCTTC TGGCCGCATG
GGCCGCATGC TCATCGAGGC GATTCAGGCG AGCGACGGCT GCGTGCTGGC TGGTGCGCTG
GACCAGCCCG GCAACCCCGC CGTGGGCACG GACGCCGCCG CGTTTTTGGG GTGCGCGAGC
GGTGTGGTCA TCACCGCTGA CCTGCGCGAG GGGCTCAAGG ACGCCGACGT GCTGATCGAC
TTCACGCGCC CCGAGGGCAC GCTGGCCCAC CTGGCCGTGT GCGCGGAACT CGGCGTGCAG
ATGGTCATCG GCACCACGGG CTTTTCCGAT GCGCAAAAGG CGCAGATCGA GGCCGCCGCG
CAGAAGGTGG GCATCGTGTT CGCGCCCAAC ATGAGCGTGG GCGTGAACGT CACGCTCAAG
CTGCTGCAGA TGGCCGCGCA GGCGCTGCGC ACGGGCTATG ACATCGAGAT CATCGAGGCG
CACCACAAGC ACAAGGTGGA CGCCCCCTCG GGCACGGCGC TGAAGATGGG CGAAGTGATT
GCCGAGGCGC AGGGCACGCG GCTCGCCGAC CGTGCCGTGT ACGAGCGCTA CGGCCACACG
GGCGAGCGCA AGGCAGACAC CATTGGCTTT GCCACCGTGC GCGGCGGCGA CATCGTGGGC
GACCACACGG TGCTGTTCGC CGGGACGGGT GAGCGGGTGG AGATCTCGCA CAAGTCCAGC
AGCCGCGCCG GCTACGCCCA GGGCAGCCTG CGCGCGGTGG GCTTCCTGGC CACGCAGCGC
GCGGGCCTGT TCGACATGTT CGACGTGCTG AACCTCAAGT AA
|
|---|
| Protein sequence | MTSSSSAPRR VAVAGASGRM GRMLIEAIQA SDGCVLAGAL DQPGNPAVGT DAAAFLGCAS
GVVITADLRE GLKDADVLID FTRPEGTLAH LAVCAELGVQ MVIGTTGFSD AQKAQIEAAA
QKVGIVFAPN MSVGVNVTLK LLQMAAQALR TGYDIEIIEA HHKHKVDAPS GTALKMGEVI
AEAQGTRLAD RAVYERYGHT GERKADTIGF ATVRGGDIVG DHTVLFAGTG ERVEISHKSS
SRAGYAQGSL RAVGFLATQR AGLFDMFDVL NLK
|
|---|
| |