Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3264 |
Symbol | holA |
ID | 7385163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3491052 |
End bp | 3492098 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643656587 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002554693 |
Protein GI | 222112429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCG CTTTGAACCA GCTTGGTGCG CAGCTGCACA AAGGCCTGCG CCCGCTCTAC ACGCTGCACG GCGACGAGGC GCTGTTGCAG CAGGAGGCGC TGGACGCCAT CCGCGCCGCG GCACGTGCGC AGGGCTATAC CGAGCGCAGC AGCTTCACCG TGGCCGGCGC GCATTTCGAC TGGAGCGGCG TGCTGGCCGC GGGCGGGTCG TTGAGCCTGT TCGCCGACAA GCAGATCGTG GAGATCCGCA TCCCCTCGGG CAAGCCCGGC AAGGACGGCG CCGCCGCGCT GCAGCAGATG GCTGCCGCCG CGCCGGGCAA CGACAGCACG CTCACCGTGG TGGTGCTGCC GCGCCTGGAC AAGGCCACGC GCACGGGCGC GTGGTTCGCA GCGCTCGAAG CGCACGGCGC CACGGTGCAG ATCGACCCCG TGGAGCGCGC CCAGCTGCCC GCCTGGATCG CCCAGCGCCT GGCCGCGCAA GGCCAGCGCG TGGTCGCGGG CGAAGAGGGG CAGCGCACGC TGCAGTTCTT CGCCGACCGG GTGGAGGGCA ACCTGCTGGC CGCGCACCAG GAGATCCAGA AGCTCGCGCT GCTGCACCCC GAGGGGGAAC TCACCTGGAC GCAGGTCGAA GCCGCCGTGC TCAACGTGGC GCGCTACGAC GTGTTCAAGC TGTCCGAGGC GGTGCTCTCC GGCCAGGTGG CGCGCGTGCA GCGCATGCTG GACGGCCTGC AGGCCGAGGG CGAGGCCGAG GTGCTGGTGC ACTGGGCGCT GGCCGAGGAC ATCCGCGCCC TCAAGCGCGT GAAAGACGCC ATGAATGCCG GCAAGCCCCT GCCCATGGCC CTGCGCGAGA ACCGCGTCTG GGGCGCGAAG GAGCGGTTGT TCGAGCGCCT GCTGCCCCAG GCCAGCGACG CCGCCCTGGC GCGGCTGCTG CAGTCCGCCC ACACGGTGGA CGGCATCGTC AAAGGCCTGA AGGCGCCCGA CTGGCCACAG GACGGCTGGC AGGCGCTCTC GCGGCTGGCG CTGCAGATGT GCAAGTTGGC GCGCTGA
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Protein sequence | MQIALNQLGA QLHKGLRPLY TLHGDEALLQ QEALDAIRAA ARAQGYTERS SFTVAGAHFD WSGVLAAGGS LSLFADKQIV EIRIPSGKPG KDGAAALQQM AAAAPGNDST LTVVVLPRLD KATRTGAWFA ALEAHGATVQ IDPVERAQLP AWIAQRLAAQ GQRVVAGEEG QRTLQFFADR VEGNLLAAHQ EIQKLALLHP EGELTWTQVE AAVLNVARYD VFKLSEAVLS GQVARVQRML DGLQAEGEAE VLVHWALAED IRALKRVKDA MNAGKPLPMA LRENRVWGAK ERLFERLLPQ ASDAALARLL QSAHTVDGIV KGLKAPDWPQ DGWQALSRLA LQMCKLAR
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