| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3241 |
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| Symbol | |
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| ID | 7383790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3454406 |
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| End bp | 3456694 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643656554 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002554670 |
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| Protein GI | 222112406 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.235789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCGG GCGATCCGCG CCCCGCGGGT TCGGCCCGCC GCGCAGAGAC ACGCGCACGC
GCCGTGCGAT GGGCGCTGGG CCTCGGCACG GGGCTGATGT GCGCCATCGC ATTGGTGCTG
CTGTTCCTGC TGACGCTGGC CACCAACAAC CGTGACCTGT ACGAACGCAA CTTCGCCTGG
CTGCTGGGCG TGAACGTACT GGTGGCGCTG GTGCTGCTGG CCGTGTTGGT CTGGGGCGCC
CTGCGCCTGG TGGTGCGCCT GAGGCGGGGG CGCTTCGGCA GCCGGCTGCT GCTCAAGCTC
GCGGGCATCT TCGGGCTGGT GGGCGTGATC CCCGGGCTGC TGATCTACGT GGTGTCCTAC
CAGTTCGTCT CGCGCTCCAT CGAGAGCTGG TTCGACGTCA AGGTCGAGGG CGCGTTGACC
GCCGGTGTGA GCCTGGCGCG CGTCACGCTC GACACCATTG CCAGCGACCT GGCCTCCAAG
ACGCGCACCG CCAGCAGCCA GTTGGCCCAG GTGCCCGATG CGGCCGCGGG CCTGGTGCTG
GAGCGCATGC GGGACCAGTT GGGGGCCACC GACCTCGTGC TGTGGAACGC CGCGGGCCAG
CCCGTCGCCG CCACCGGGCA ATCGCGCTAC ATGCTCAACC CCGAGCGCCC GAGCGCGCAG
CAGTTCCGCA TGGCGCGGCA AGACCGCGTC ACCTTCCAGA TCGAGGGCCT GGACGACATC
ACCGACCCGC TGGCCGCGGA GAACGCGCGC GTGCGCGCGC TGGTGCTGGT GGCCAACCCC
GGCGTGGGTC TGCTGGCCGA GCCGCGCTTC GTGCAGGCCA CCGTGCCCTT GCCCCAGGCG
CTGGTCGCCA ACGCCATTGC GGTGCAGGAA GCAAACCGCG AATACCAGGA ACGGGCGCTG
GCGCGCGGCG GGCTGCGGCG CATGTACATC GGCACGCTGA CGCTGAGCCT GTTCCTTGCC
GTCTTTGGCG CGGTGCTGCT CGCCGTGGTG CTGGGCAACC AGCTTGCGCG GCCCCTGCTG
GTGCTGGCCG ACGGCGTGCG CGAGGTGGCG GCAGGCAACC TGTCGCCCAA GGCCGCGCTG
CAGACCAAGG ACGAGTTGGG CGGGCTGACG CGCTCTTTTG CCCTGATGAC GCAGCAGCTT
GCGGACGCCC GCGGCACGGT CGAGCAAAGC CTGAACGCGC TGGACGCCGC GCGCGGGCAC
CTGCAGACCA TCCTGGACAA CCTCACGTCG GGAGTCATCG TGCTGGATGA AAAAGGCATC
GTCCAGTCGT CCAACCCTGG TGCGACCCGT GTCCTGCGCG CGCCACTGGC GGCCTATGAA
GGACGGCCGC TGGCTGAGGT GCCGGGGCTG GCGGATTTCG CGGCGGCCGT GCAGCGGCAC
TTCGATACCT TTTTGCTGGA TCGTGACCAC CACGGTCTGG ACCACTGGCA GCAGACCTTT
GAGCTGCACG CGGCGGGCGG TGGCGTCACC ACGCAAGGCA CCAGCCTGGT GGCGCGCGGC
GCGCAACTGC CCAACGAGGC GCGGCTGCTG GTGTTCGACG ACATCTCCGA AATCGTCTCC
GCGCAGCGCG CCCAGGCGTG GGGCGAGGTT GCTCGGCGTT TGGCGCACGA GATCAAGAAC
CCGCTGACGC CGATCCAGCT CTCGGCCGAG CGTCTGGAGA TCAAGCTCTC AGGCAAGCTG
CCTGCGGCAG AGCAGGCCGT GCTGACCAAG TCGGTGAAGA CCATCGTGGA CCAGGTGGAT
GCGATGAAAC GGCTGGTCAA TGAATTCCGC GACTACGCGC GCCTGCCGTC TGCGGAGCTG
CACACGCTGG ACCTGAACGC ACTGGTTGCC GATGTGCTGC ATTTGTATGG CGCCGAGACC
GCGCAGGTGC CGGTCGAGGC CGAGCTGGAC CCGCGCTGCC CCGCGATCTC CGGCGATGCC
CAGCAATTGC GCCAAGTGGT GCACAACCTA CTGCAGAACG CTCAGGACGC GACACAGCAG
GCGGCCGAGC AGGGGGGCGT TCCACCGCCG CCCGTACGCA TCAGCACACG CTGGAGTGCA
TCCGCGAAAC GTGTGCGGCT GACGGTGTCG GACTGCGGGC CGGGCTTTCC TCCACACATC
CTGCAGCGCG CCTTCGAGCC CTACGTCACG ACCAAGCCGC GGGGCACCGG GCTGGGACTG
GCCGTCGTCA AAAAAATCGC GGATGAACAT CGCGCGCGGA TCGATCTGGT CAACCGCGTG
GAAGACGGCG TGGTGAAGGG CGCACAAGTG TCGCTATCAT TCGCCCCTGA ATCGGCGGTG
GCGCTCTAA
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| Protein sequence | MKAGDPRPAG SARRAETRAR AVRWALGLGT GLMCAIALVL LFLLTLATNN RDLYERNFAW
LLGVNVLVAL VLLAVLVWGA LRLVVRLRRG RFGSRLLLKL AGIFGLVGVI PGLLIYVVSY
QFVSRSIESW FDVKVEGALT AGVSLARVTL DTIASDLASK TRTASSQLAQ VPDAAAGLVL
ERMRDQLGAT DLVLWNAAGQ PVAATGQSRY MLNPERPSAQ QFRMARQDRV TFQIEGLDDI
TDPLAAENAR VRALVLVANP GVGLLAEPRF VQATVPLPQA LVANAIAVQE ANREYQERAL
ARGGLRRMYI GTLTLSLFLA VFGAVLLAVV LGNQLARPLL VLADGVREVA AGNLSPKAAL
QTKDELGGLT RSFALMTQQL ADARGTVEQS LNALDAARGH LQTILDNLTS GVIVLDEKGI
VQSSNPGATR VLRAPLAAYE GRPLAEVPGL ADFAAAVQRH FDTFLLDRDH HGLDHWQQTF
ELHAAGGGVT TQGTSLVARG AQLPNEARLL VFDDISEIVS AQRAQAWGEV ARRLAHEIKN
PLTPIQLSAE RLEIKLSGKL PAAEQAVLTK SVKTIVDQVD AMKRLVNEFR DYARLPSAEL
HTLDLNALVA DVLHLYGAET AQVPVEAELD PRCPAISGDA QQLRQVVHNL LQNAQDATQQ
AAEQGGVPPP PVRISTRWSA SAKRVRLTVS DCGPGFPPHI LQRAFEPYVT TKPRGTGLGL
AVVKKIADEH RARIDLVNRV EDGVVKGAQV SLSFAPESAV AL
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