| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3135 |
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| Symbol | |
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| ID | 7383357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3350627 |
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| End bp | 3352801 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643656451 |
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| Product | primosomal protein N' |
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| Protein accession | YP_002554568 |
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| Protein GI | 222112304 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.504051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACC GCTCCCTGTC CCCGACCACG CCGCATGACA GCGCCGCCTG CCTGCTCTGC
GTGGCCGTGA GCACGCCGGC GCACAGTGGC GTGGGCGAAC CGCTGAGCTA TGCCAGCCCG
CGCCCGCTGC CTCCGGGGAC ACTGGTGCGC GTGCCGCTGG GCGCGCGCGA GGTGCTGGGC
GTGGTCTGGG ACGCGCCCGC CGAGCCAGCG GCGCTACCGC CGGGCATGGT GCCGCGCACG
GTGGCGGGCG TGCTCGAAGG CGTGGCGCCG CTGGACGCCG CCTGGCGCCG TCTGGTGAGC
TTCGCCGCGC GCTACTACCA ACGCGCGGTG GGCGAGGTGG CGCTGGCCGC CCTGCCCCCA
CAGCTGCGCG ACCTCACGCC CGAGCAGTTG GCGCGGCGCC TGCGCCGCCC CGCACCGCCG
GCGCACCCTT CCGAAGCAGT TGCAAAAACA ATAGCACTTA CCGCAGAACA GGCAAGCGCT
ACAGCCCAAA TCGATACAGA GCGCGGGCCC TTCCTGTTGT TCGGCAGCAC GGGCAGCGGC
AAGACCGAGG TGTACCTGCA CTGCGTGCAG CGCGCCCTGG CCGGCCATCC CGCCGCACAG
GCACTGGTGA TGGTGCCCGA GATCAACCTC ACCCCGCAGC TGGAGGCGCG CTTTCGCGAG
CGCTTCGCGC CCCTGTACGG CGAGGCGGCC GTGGTCAGCA TGCACAGCGG GATGACGCCG
GCACAGCGCC TGAAGAGCTG GCTCGCCGCG CATACGGGCG CTGCGCGCAT CGTGCTCGGC
ACGCGCATGG CGGTGTTCGC CAGCCTGCCG GGGCTGGCAC TGGTCGTGGT GGACGAGGAG
CATGACGCCA GCTACAAGCA GCAGGAGGGC GCGCGCTACT CCGCGCGCGA CCTGGCGCTG
TGGCGCGGAC GCGAGCAGGG CGCCAAGGTG ATCCTGGGCA GCGCCACCCC GTCGCTGGAG
AGCTGGCATG CCAGCACCCC GGCCAGCGAG GGGGGCCCGG GCCGTTATCT GCGCCTGCAC
ATGCCCAGCC GTATCGGCTC AGGGGACGGC GCCGGCACAG GCGAGCTGCC GCGCGTGCGC
CTGGTGGACA TGGGACAACA GCCGCGCAGT TCGGGGGCGG GTGGCGTGTT CTCGCCCCCG
CTGCTGGCCG CCATCACCGA ACGGGTGCAG CGCGGGGAGC AATGCCTGGT GCTGCTCAAC
CGCCGGGGCT TTGCACCCGT GCTGCACTGC CATGACTGCA GCTGGAAGAG CGACTGCCCG
CACTGCAGCG CCCACCAGGT ATTCCACAAG AGCGACCGCA CGCTGCGCTG CCACCACTGT
GGCTTTACGC AACGCGTGCC GCGGGCCTGC CCCAGCTGCG GCAACCCGGA CATCCTGCCC
CTGGGCCGGG GCACCGAGCA GCTGGAAGAG CAACTGGCCG CCCTGCTGCG CAACGTGATC
ACCCCGGACC GCCGCGCCGC GCGCGTGGCA CGCATCGACG CCGACACCAC CCGCGCCAAG
GGGGCGCTGG AGGAGCAACT GGCCCAGGTG CACAGCGGCG AGGTGGACGT GCTGGTCGGC
ACGCAGATGG TGGCCAAGGG ACATGACTTT CGGCGCATCA CCCTGGTGGC GGCCGTGCAG
CCCGACGGAG CGCTCTTCAG CAGCGACTTC CGCGCGCCCG AGCGCATGTT CGCCCTGCTG
ATGCAGGCCG CGGGCCGCGC GGGGCGCGAT GCGCGCTATG TGGCCGCGCA GGGCAGCCCG
CCCGAGATGT GGATCCAGAC CTGGCACCCC GACCACGCCG TCTATGCCGC GCTGCGCCGC
CACGACTACC CGGCCTTCGC CGCGCGCCAG CTGGCCGAAC GCCAGGAAGC CGGCATGCCG
CCCTTCGCCT ATCAGGCGCT GGTGCGCGCA GACGCCCGCA CGCAGGAGGC GGCCCAGGCC
TTCCTGCAGG CCGCCAGCGA CGCCGCGCGC GCCGCCGGGC TGCCGGGGCT GGACCAGGTC
TTCCTGTTCC CGCCGGTGCC GCTCGCCATC CAGCGCGTGG CCAATGTGGA GCGCGCGCAG
ATGCTGCTGG AAAGTCCCCA GCGCGGTGCG CTGCAGCGCT TTCTGGCCGC GTGGCAGCCG
CTGCTGCATG CCGAGCGCCC GCGCCACCGC GGCCTGGTGC GCTGGCTGGT GGACGTGGAC
CCGCAGGCGA TCTGA
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| Protein sequence | MPDRSLSPTT PHDSAACLLC VAVSTPAHSG VGEPLSYASP RPLPPGTLVR VPLGAREVLG
VVWDAPAEPA ALPPGMVPRT VAGVLEGVAP LDAAWRRLVS FAARYYQRAV GEVALAALPP
QLRDLTPEQL ARRLRRPAPP AHPSEAVAKT IALTAEQASA TAQIDTERGP FLLFGSTGSG
KTEVYLHCVQ RALAGHPAAQ ALVMVPEINL TPQLEARFRE RFAPLYGEAA VVSMHSGMTP
AQRLKSWLAA HTGAARIVLG TRMAVFASLP GLALVVVDEE HDASYKQQEG ARYSARDLAL
WRGREQGAKV ILGSATPSLE SWHASTPASE GGPGRYLRLH MPSRIGSGDG AGTGELPRVR
LVDMGQQPRS SGAGGVFSPP LLAAITERVQ RGEQCLVLLN RRGFAPVLHC HDCSWKSDCP
HCSAHQVFHK SDRTLRCHHC GFTQRVPRAC PSCGNPDILP LGRGTEQLEE QLAALLRNVI
TPDRRAARVA RIDADTTRAK GALEEQLAQV HSGEVDVLVG TQMVAKGHDF RRITLVAAVQ
PDGALFSSDF RAPERMFALL MQAAGRAGRD ARYVAAQGSP PEMWIQTWHP DHAVYAALRR
HDYPAFAARQ LAERQEAGMP PFAYQALVRA DARTQEAAQA FLQAASDAAR AAGLPGLDQV
FLFPPVPLAI QRVANVERAQ MLLESPQRGA LQRFLAAWQP LLHAERPRHR GLVRWLVDVD
PQAI
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