| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3127 |
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| Symbol | |
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| ID | 7383349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3340032 |
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| End bp | 3342248 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643656443 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_002554560 |
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| Protein GI | 222112296 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTGCC TTCGCCCCTT GCAGCGCTCC CTGCACACTC TTTTTTTCAT AGCTGCTTGC
GCTGTATCCA CGGGCGCCAT CGGCCAAATT CAGCTCAAGA CAACCGCCGC CGCGGGCAGC
AGCAGCGTCG TCACGCCGCA TGTGCGCGCC GAGCTGGTGG CCCAGGCACC CGACGGTGTG
GGCCCGGGCA AGCCGCTGTG GCTGGGCCTG TCGATCACGC ACCAGCCCGA ATGGCACACC
TACTGGAAGA ACCCGGGCGA CTCCGGCCTG CCCACGCAAT TGGAGTGGCA GCTGCCGGCG
GGCATCGATG CGGGCGAGGT CGCCTGGCCC GTGCCCAAGA AGATTCCGCT GGGCAACCTG
GCCAACTACG GCTACGAGGG CACGGTGCTG TTGCCCGTGC CCATGACCGT CTCCCCGGCC
TTCAACCCCG GCCCGCTGGC CAAGGAAGCG ACCTTCCAGC TCAAGGCCTC GTGGCTGGTG
TGCCGCCAGG AGTGCATCCC CGAAGAGGGC AGCTTCACGC TGCAATTGCC GCTGCAAGGC
ACGACGGCGC TGCATGCCGC CGCGTTCGAT GCCGCCGCCG CGGCGCACCC GCGCGATCTG
CCGGCTCTAG GCGGCAGCAG CGCGCAGGTC GAGGGCGACG CCGTGCTGCT GCGCGTGGCC
GGCCTGCCCC CGGCGCTGCA GGGCCAGACG CTGGAGGTGT TCCCCGAGAC CACGGGCGTG
GTGGAGACCG CCGCCACGCC CGCGCAGCAG TGGGACGGCG CGGTGTGGAC CGCGCGCCTG
CCGCTGTCGC CCCAGCGCAG CGACGGGCCC GTACCGATGC CGGTGGTGCT GGCCCATGGC
GGCCAGGGCT GGCGTGCCGA GCTGCCCGTG CCGGGCGGCT GGCCCGCCGT GGCGGCACTG
AAGGGCATGT CGCCCGCGCT GGAGGCCGCG CTGAAAGCCA ACGCCGCCAA TGCCGCCGCG
CCCGCGGCCC CCGCCGCTGC GACACCCGCG CCGCTGGGCA CCTGGCTGGC CGCGCTGGCC
GGCGCGCTGC TGGGCGGGCT GATCCTGAAC CTCATGCCCT GCGTGTTCCC GGTGCTGGCG
ATCAAGGTGG TGGGCTTTGC GCGCCATGCG CAGAACCAGC GCGCCCACCG CATCGGCGGG
CTGGCCTACA CCGCGGGCGT GGTGCTGTCG TTCCTGCTGC TGGGCGCGCT GATGCTGGGC
CTGCGCACCG CGGGCGAAGC CGTGGGCTGG GGCTTTCAGC TGCAGTCGCC GGCGGTGGTG
GCGTCGCTCG CCGCGCTGTT CACGCTGATC GGATTGAACC TGGCGGGCGT CTTCGAGTTC
GGGCGCATGC TGCCCTCGTC GCTGGCGGGC CTGCAGGCGC GCCACCCCGT GCTGGATGCC
TTCCTGACCG GCGTGCTCGC CGTGGCCGTG GCCTCGCCGT GCACGGCGCC GTTCATGGGC
GCATCGCTGG GCCTCACGGC CACGCTGCCC GCGGGGCAGG CACTGTCGAT CTTCGCGGCG
CTGGGCCTGG GCCTGGCCCT GCCCTACCTG CTGGCCAGCT GGCTGCCCGC GTTTGCGCGC
GCCCTGCCGC GGCCGGGCGC GTGGATGGAC ACGCTGCGCC GCCTGCTGGC GTTCCCGATG
TTCGCCACCG TGGTGTGGCT GGTGTGGGTG CTGGGCCAGC AAAGCGGCAT CAACGGCGCG
GCGGCGCTGC TGGCGCTGCT GGTGGCGCTC AGCATGGCCG TGTGGGCGCT CACGCTGCGC
GGGGCCACGC GGGCGGTTCT CGCCCCTCTT TCCATAGCTG CTTGCGCTTG GCTGGTATGG
CTTTGGGGCC CAAAGATCAT TGAACTGGAA AGCACACCCA TGGCCGCAGC CTCCGCCCCC
AGCGGCGTGG CCGGCGTGAC CTCCTGGCAG CCCTGGCGCC CTGGCCTGGC CGACGAGCTG
GTGGCCCAGG GCCGCCCGGT GTTCGTGGAC TACACAGCCG CCTGGTGTGT GACCTGCCAG
TACAACAAGA ACACCACGCT GGCCAGCGCT GCGGTGCTGC AGGACTTTGC AACGAAGAAC
GTGGCCCTGC TGCGCGCCGA CTGGACGCGG CGCGACCCCG CCATCACCGC CGCGCTGGCA
CAGCTCGGCC GCAGCGGCGT GCCGGTCTAT GTGCTGCATG CGCCGGGCAA GGCGCCGGTG
GTGTTCTCCG AGATCCTGGG CGAGTCGGAA CTGCGCGCCG CCATGTCCGC GCTCTGA
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| Protein sequence | MSCLRPLQRS LHTLFFIAAC AVSTGAIGQI QLKTTAAAGS SSVVTPHVRA ELVAQAPDGV
GPGKPLWLGL SITHQPEWHT YWKNPGDSGL PTQLEWQLPA GIDAGEVAWP VPKKIPLGNL
ANYGYEGTVL LPVPMTVSPA FNPGPLAKEA TFQLKASWLV CRQECIPEEG SFTLQLPLQG
TTALHAAAFD AAAAAHPRDL PALGGSSAQV EGDAVLLRVA GLPPALQGQT LEVFPETTGV
VETAATPAQQ WDGAVWTARL PLSPQRSDGP VPMPVVLAHG GQGWRAELPV PGGWPAVAAL
KGMSPALEAA LKANAANAAA PAAPAAATPA PLGTWLAALA GALLGGLILN LMPCVFPVLA
IKVVGFARHA QNQRAHRIGG LAYTAGVVLS FLLLGALMLG LRTAGEAVGW GFQLQSPAVV
ASLAALFTLI GLNLAGVFEF GRMLPSSLAG LQARHPVLDA FLTGVLAVAV ASPCTAPFMG
ASLGLTATLP AGQALSIFAA LGLGLALPYL LASWLPAFAR ALPRPGAWMD TLRRLLAFPM
FATVVWLVWV LGQQSGINGA AALLALLVAL SMAVWALTLR GATRAVLAPL SIAACAWLVW
LWGPKIIELE STPMAAASAP SGVAGVTSWQ PWRPGLADEL VAQGRPVFVD YTAAWCVTCQ
YNKNTTLASA AVLQDFATKN VALLRADWTR RDPAITAALA QLGRSGVPVY VLHAPGKAPV
VFSEILGESE LRAAMSAL
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