Gene Dtpsy_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3122 
Symbol 
ID7383344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3335174 
End bp3336433 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content66% 
IMG OID643656438 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002554555 
Protein GI222112291 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC CCGTCCACCT CACTCCGCAC CCCCTGACCC GCGCCTGCCG CGCGCTGTGC 
ACGGGCCTTG CCCTGCTGGC CGCCACGGCC ACCGTCACCG CCCAGGGCAC GGCAATTTCT
GACGACGTGG TGCGCCTGGG CATCCTCACC GACCTGAACG GTCCGTTCGC CGACATCACC
GGCCCAGGCA GCGCCGCCGC CATCCAGATG GCCATCGACG ACTTCGGCGG CAAGGTAGCG
GGCAAGAAGA TCGAACTGGT GGTGGCCGAT CACCAGAACA AGGCCGACAT CGCCTCCAGC
AAGGCGCGCG AGTGGTTCGA TACCGGCAAG GTGGACGCCA TCATGGACGT GGCCGTCTCC
GCGCCGGCGC TGGCGGTGCT GGAGGTGGCC AAGCAAAAGC AGAAGGTCGT CATCTTCAAC
GGCCCCGGCC TGGACCGCCT CACGGGCGAC CTGTGCATGC CCAGCACCGT GCACTACGTG
TACGACACCT ACGCCCTGGC CAACGTGACG GCCAGCGCCA TCACCGCACG CGGCGGAAAG
GACTGGTTCT TCATCACCGC CGACTACGCC TTTGGGCACA GCCTGCAGGA GCAGGCCAGC
GCCGTGGTCA CGGCCCAGGG CGGCAAGGTG CTGGGCGCGG CCCGCCACCC GATCGCGGCG
ACCGACTTCG CCTCGTTCCT GATCAGCGCG CAGAACAGCA AGGCCCAGGT CGTGGGCCTG
GCCAACGCGG GGGGCGATAC GGTGAACACC ATCAAGGCCG CGCGCGAGTT CGGCCTGACC
ACGGGCAAGA ACAAACAGAC CCTGGCCGGC CTGCTCATGT ACATCAACGA CATCCACGCC
ATCGGCCTGC GCACCGCCGG CGGCCTGATG CTGACCGAGG GCTTCTACTG GGACATGAAC
GACGAGACGC GCGCCTGGTC CAAGCGCTAC TTCGAGAAGA TGAAGAAGAT GCCCAACATG
AGCCAGGCGG GCGCCTATTC CTCGACCATG CATTACCTGA AGGCCGTGCA GGCCGCCAAG
ACCGACGACA CGGCCCATGT CATGGCCAAG ATGAAGGCCA CGCCCATCAA CGACTTCTTC
GCCAAGAACG GCCGCATCCG CGAGGACGGC CGCATGGTGC ATGACATGTA CCTGTTCGAG
GTCAAGTCGC AGGCCGAGTC CAAGTACCCG TGGGACTACT ACAAGCTCGT GGCCACCGTA
CCCGGCGACA AGGCCTTCCT GCCACTGTCG CAGTCCAAGT GCCCCATGGT GAAGAAATGA
 
Protein sequence
MNRPVHLTPH PLTRACRALC TGLALLAATA TVTAQGTAIS DDVVRLGILT DLNGPFADIT 
GPGSAAAIQM AIDDFGGKVA GKKIELVVAD HQNKADIASS KAREWFDTGK VDAIMDVAVS
APALAVLEVA KQKQKVVIFN GPGLDRLTGD LCMPSTVHYV YDTYALANVT ASAITARGGK
DWFFITADYA FGHSLQEQAS AVVTAQGGKV LGAARHPIAA TDFASFLISA QNSKAQVVGL
ANAGGDTVNT IKAAREFGLT TGKNKQTLAG LLMYINDIHA IGLRTAGGLM LTEGFYWDMN
DETRAWSKRY FEKMKKMPNM SQAGAYSSTM HYLKAVQAAK TDDTAHVMAK MKATPINDFF
AKNGRIREDG RMVHDMYLFE VKSQAESKYP WDYYKLVATV PGDKAFLPLS QSKCPMVKK