Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3113 |
Symbol | |
ID | 7383336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3324240 |
End bp | 3325646 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643656429 |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_002554546 |
Protein GI | 222112282 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAT CCGGCCCTTC AAGCACCGAC GCCTCCCGCA CCCACGCAAC CACCAGCCGC GGCGCCTTCT CCTCCAGCCT GGGCGTGCTC GCCGCCACGC TGGGTTCCGC CGTCGGGCTG GGCAACATCT GGAAGTTCCC CTCGCTCACC GGGGCCAACG GTGGCGCGGG CTTTCTGCTG ATCTACCTGC TCTCGACGCT GTTCATCGGC CTGCCGCTCA TGGTGGCCGA GATCGCCATC GGCCGCCAGG CGCGCGCCAA TCCCATCTCT GCGCTGCGCC AGTTGCAGCC CCGCGGCGCG CCGTGGTGGC TGATCGGCGT GGCAGGCATG GCGGCGGCGT TCCTGATCAT GGCGTTCTAT TCCGAGGTCG TCGCCTGGGT GTTTGCCTAC GTGGCCAAGG CCCTTTCGGG CAACCTGCTG TCCAGCGACC CGGTGCAGAC GCAGGCCAGC TTCGACGCCC TGGTGCGGGA CCCGGTGCAG GCGCTGCTGT GGCAGTGGGT GGTGCTGGCC TTCATCGGCG GCATCCTGCT GCTGGGCGTC ACCCGCGGCA TCGAGGCGGC CACCAAACGC CTGATGCCGC TGCTGTTCCT GCTGCTGGTG CTGCTGGGCG GCTACAGCCT GACGCTGCCC GGCGCCGGCC AGGCGCTGTC GTTCCTGTTC GCGCCCGAGT GGCACAAGAT CACGCCCGCG GTGGTGCTGA CCGCCATGGG CCTGGCGTTC TTCAAGCTGT CCATCGGCAT GGGCACGATG ATGACCTACG GCAGCTACTT CACCGCCGAG CAGAACATCC CGGCCACCGC CACGCGCGTG ATGCTGGCCG ACCTGTCGGT GTCGCTGCTA GCGGGCATGG CGATCTTCCC CGCGGTGTTC AGCTTCGGCT TCCAGCCGTC GGCGGGGCCA TCCCTGGTGT TCATCACGAT CCCCGCGGTG TTCGCACAGA TGCCGGGTGG CTCGGTGCTG CTGGCGGCGT TCTTCCTCCT CACCGCTATC GCCGCGACCG GCGCCATGCT CTCCCTGATG GAGGTACCGG TCGTCATCCT GCACGAGCGC TGGGGCCTGA GCCGGCCCCG GGCCACGCTG CTCACGCTGC TGATCCTGGG GCTGCTGGGC GCGGGCTGCG CCCTGAGCCA GAGCACGCTG GCCGCCTTCC AGCCGGGCGG GCGCACCCTG TTCGACTGGG CGGACTACCT CTCGTCCAAC CTGCTGCTGC CCGCGGGGGG CATCGCCATC GCCCTCTTCG TCGGCTGGGC CTGGGGCGAG CGCGCATTCG CGGCGCAACT CTCCAACCAC GGGCAGTTGG GCAACCAGGG GCTGGCCCGC GTCGTGAGCC TGCTGCTGCG CTGGGTCACG CCGGTGCTGA TCCTGCTGGT CATGCTCGCG GGGCTGGGGG TGTTCTCCGG CACGTGA
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Protein sequence | MSKSGPSSTD ASRTHATTSR GAFSSSLGVL AATLGSAVGL GNIWKFPSLT GANGGAGFLL IYLLSTLFIG LPLMVAEIAI GRQARANPIS ALRQLQPRGA PWWLIGVAGM AAAFLIMAFY SEVVAWVFAY VAKALSGNLL SSDPVQTQAS FDALVRDPVQ ALLWQWVVLA FIGGILLLGV TRGIEAATKR LMPLLFLLLV LLGGYSLTLP GAGQALSFLF APEWHKITPA VVLTAMGLAF FKLSIGMGTM MTYGSYFTAE QNIPATATRV MLADLSVSLL AGMAIFPAVF SFGFQPSAGP SLVFITIPAV FAQMPGGSVL LAAFFLLTAI AATGAMLSLM EVPVVILHER WGLSRPRATL LTLLILGLLG AGCALSQSTL AAFQPGGRTL FDWADYLSSN LLLPAGGIAI ALFVGWAWGE RAFAAQLSNH GQLGNQGLAR VVSLLLRWVT PVLILLVMLA GLGVFSGT
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