Gene Dtpsy_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3113 
Symbol 
ID7383336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3324240 
End bp3325646 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content70% 
IMG OID643656429 
Productsodium:neurotransmitter symporter 
Protein accessionYP_002554546 
Protein GI222112282 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAT CCGGCCCTTC AAGCACCGAC GCCTCCCGCA CCCACGCAAC CACCAGCCGC 
GGCGCCTTCT CCTCCAGCCT GGGCGTGCTC GCCGCCACGC TGGGTTCCGC CGTCGGGCTG
GGCAACATCT GGAAGTTCCC CTCGCTCACC GGGGCCAACG GTGGCGCGGG CTTTCTGCTG
ATCTACCTGC TCTCGACGCT GTTCATCGGC CTGCCGCTCA TGGTGGCCGA GATCGCCATC
GGCCGCCAGG CGCGCGCCAA TCCCATCTCT GCGCTGCGCC AGTTGCAGCC CCGCGGCGCG
CCGTGGTGGC TGATCGGCGT GGCAGGCATG GCGGCGGCGT TCCTGATCAT GGCGTTCTAT
TCCGAGGTCG TCGCCTGGGT GTTTGCCTAC GTGGCCAAGG CCCTTTCGGG CAACCTGCTG
TCCAGCGACC CGGTGCAGAC GCAGGCCAGC TTCGACGCCC TGGTGCGGGA CCCGGTGCAG
GCGCTGCTGT GGCAGTGGGT GGTGCTGGCC TTCATCGGCG GCATCCTGCT GCTGGGCGTC
ACCCGCGGCA TCGAGGCGGC CACCAAACGC CTGATGCCGC TGCTGTTCCT GCTGCTGGTG
CTGCTGGGCG GCTACAGCCT GACGCTGCCC GGCGCCGGCC AGGCGCTGTC GTTCCTGTTC
GCGCCCGAGT GGCACAAGAT CACGCCCGCG GTGGTGCTGA CCGCCATGGG CCTGGCGTTC
TTCAAGCTGT CCATCGGCAT GGGCACGATG ATGACCTACG GCAGCTACTT CACCGCCGAG
CAGAACATCC CGGCCACCGC CACGCGCGTG ATGCTGGCCG ACCTGTCGGT GTCGCTGCTA
GCGGGCATGG CGATCTTCCC CGCGGTGTTC AGCTTCGGCT TCCAGCCGTC GGCGGGGCCA
TCCCTGGTGT TCATCACGAT CCCCGCGGTG TTCGCACAGA TGCCGGGTGG CTCGGTGCTG
CTGGCGGCGT TCTTCCTCCT CACCGCTATC GCCGCGACCG GCGCCATGCT CTCCCTGATG
GAGGTACCGG TCGTCATCCT GCACGAGCGC TGGGGCCTGA GCCGGCCCCG GGCCACGCTG
CTCACGCTGC TGATCCTGGG GCTGCTGGGC GCGGGCTGCG CCCTGAGCCA GAGCACGCTG
GCCGCCTTCC AGCCGGGCGG GCGCACCCTG TTCGACTGGG CGGACTACCT CTCGTCCAAC
CTGCTGCTGC CCGCGGGGGG CATCGCCATC GCCCTCTTCG TCGGCTGGGC CTGGGGCGAG
CGCGCATTCG CGGCGCAACT CTCCAACCAC GGGCAGTTGG GCAACCAGGG GCTGGCCCGC
GTCGTGAGCC TGCTGCTGCG CTGGGTCACG CCGGTGCTGA TCCTGCTGGT CATGCTCGCG
GGGCTGGGGG TGTTCTCCGG CACGTGA
 
Protein sequence
MSKSGPSSTD ASRTHATTSR GAFSSSLGVL AATLGSAVGL GNIWKFPSLT GANGGAGFLL 
IYLLSTLFIG LPLMVAEIAI GRQARANPIS ALRQLQPRGA PWWLIGVAGM AAAFLIMAFY
SEVVAWVFAY VAKALSGNLL SSDPVQTQAS FDALVRDPVQ ALLWQWVVLA FIGGILLLGV
TRGIEAATKR LMPLLFLLLV LLGGYSLTLP GAGQALSFLF APEWHKITPA VVLTAMGLAF
FKLSIGMGTM MTYGSYFTAE QNIPATATRV MLADLSVSLL AGMAIFPAVF SFGFQPSAGP
SLVFITIPAV FAQMPGGSVL LAAFFLLTAI AATGAMLSLM EVPVVILHER WGLSRPRATL
LTLLILGLLG AGCALSQSTL AAFQPGGRTL FDWADYLSSN LLLPAGGIAI ALFVGWAWGE
RAFAAQLSNH GQLGNQGLAR VVSLLLRWVT PVLILLVMLA GLGVFSGT