Gene Dtpsy_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3111 
Symbol 
ID7383334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3321577 
End bp3322839 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID643656427 
Productflagellar hook-associated protein 3 
Protein accessionYP_002554544 
Protein GI222112280 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCT CTTTCTATCG CGTCAGCACC GCCAACATGT ACGACGCCAC GCTGCGCAAC 
CTCAGCGCGC GGCAGAAATC CCTGGTGGAC CTGCAGGAGA ACCTCACCGC GGGCAAGCGC
GTGGTGCGTC CCAGCGACGA CCCCGTGGCC GCCGCCCAGG CCGAGCGCGC GCTCACGCGC
ATCAGCCGCA TCCAGACCGA GCAACGCGCG CTGGACGTGC AGCGCAACGC CATCGCACAG
GCCGAATCCA CCCTGGGCGA CGCCGTGGGC CTGGTGCAGG AGATTCGCCA GCTGGTCGTG
GCCGCCGGTG GCGGCGCGCT CAAGCCCGAG GACCGCAAGA CCTACGCCAA CCAGATCCAG
AGCCTGCGCG AGCAGCTCAC GCAGGTGATC AACCGCAAGG ACACCAACGG TGTGCCGCTG
CTGGGCGCGC TGGGCAGTGC GCTGGAGCCC TTCACCGGCC CGCTACTGAG CAACCCCGAC
TACCTGTTCG CCGGGCTGCC CGGGCAGGCG GCCAGCGGCG GCACGTCGAT TCCCACCACC
GTGGACGGGC ATGCGGCGCT GATGTTCGAC CCGGTGCGCG ACGGCGTGTA CACCGCCACC
GTCACGCGCG GCGCAGGCAG TTCCCTGGTG ACGAGCGCCA TCACGACCTC CAACCGCGAG
GCACTGGACG GCGCGCAGTA TGCGCTGGCC GTGAACACCG TCACGGTGGA CCCGGTAGCG
GGCACCACCG TCGTCGACTA CAAGTTGACC AAGACCGCCA AGGACGGCAC GGTGACCACC
TCGAACGTGA CCACCGCGCC CGTCAAGACC GGCCAGCCCA TTCCCATCAC CATCAACGAA
GGCCCGGACA CGGTCATGTC GTTCAGCCTG ACGGGCACGC CCGCGGCGGG CGACAGCGTT
TCCCTGCAGC CCAGCTCCAG CCTGATGGGC ACCATCGACA GCGCGATCCG CGGGATCACC
GACGCCACCG ACAGCGTGGC CGCGTCCCAG GCCGTCGGCC AGGCCCTGGC CAACATCGAC
GCCGGCATGG AACGCCTGCA CAACATGCGC GGCTATGCGG GCGAGCTGCT CAACCGCGCC
GACCGCATCA CCGGCGACCA GGACAAGCGC TCGATCCAGC TCGAAGCCGA CCGCTCGCGC
GCGGAGGACC TCGACATGGT GCAGGGTATC TCGGACTTCC AGAACGCCAG CGTGGGCTAC
GAGGCCGCCC TCAAGTCCTA CGCGCAGGTG CAGCGCCTGT CGCTCTTCAA TTTCATCAGC
TGA
 
Protein sequence
MSSSFYRVST ANMYDATLRN LSARQKSLVD LQENLTAGKR VVRPSDDPVA AAQAERALTR 
ISRIQTEQRA LDVQRNAIAQ AESTLGDAVG LVQEIRQLVV AAGGGALKPE DRKTYANQIQ
SLREQLTQVI NRKDTNGVPL LGALGSALEP FTGPLLSNPD YLFAGLPGQA ASGGTSIPTT
VDGHAALMFD PVRDGVYTAT VTRGAGSSLV TSAITTSNRE ALDGAQYALA VNTVTVDPVA
GTTVVDYKLT KTAKDGTVTT SNVTTAPVKT GQPIPITINE GPDTVMSFSL TGTPAAGDSV
SLQPSSSLMG TIDSAIRGIT DATDSVAASQ AVGQALANID AGMERLHNMR GYAGELLNRA
DRITGDQDKR SIQLEADRSR AEDLDMVQGI SDFQNASVGY EAALKSYAQV QRLSLFNFIS