Gene Dtpsy_3110 details

Gene Information

• Locus tag: Dtpsy_3110
• ID: 7383333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3319547
• End bp: 3321565
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643656426
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_002554543
• Protein GI: 222112279
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.293616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTTC TGAACGTCGG CGCCCGCGCC CTCCTCGCCA ACCAGGTCGC CTTGCAGACC 
ACCGGGCACA ACATCGCCAA CGTCAGCACG GCCGGATATT CGCGCCAGAA CGTGGCAATG 
GAGACCGTGC AGGGCCAGTT CACCGGCTCA GGCTACATCG GCAACGGCGT GCAGGTGGCG 
ACCATCCTGC GCAATCACAA CGAGCTGCTC ACGCGCCAGG CCGCGGCCGC ACAGGCGGTG 
CAGGCGGGCG ACACCGTGCG CGCCGAGCGC CTCGGCCAGT TGCAGGACGT GTTCCAGGGG 
GGCACCAGCG GCCTGGGCGC CGCCATCACC GACATGCTGA ACTCGCTGGC CGACGTGGTG 
TCCTCGCCGA CCGACATCAC GGCGCGCACC GTCACGCTCA CGCGCATGGA CGAGATGGCC 
GCGCGCATGC GCAGCAGCGC GGAGCAGTTG CAGGAGATCG CATACTCGGT CAACGAGCAG 
CTGCAGAACG ACGCCACGCG CGTCAACTCG CTGGCCAAGA GCATCGCGGA CGTGAACGAG 
CAGATCGCCC GCGTGAAGGG CAACGGCCAG ACTCCCAACG ACCTGCTGGA CAAGCGCGAC 
CAGCTAATCC GGGAACTCAA CCAGTTCATC CAGACCACGC AGATCCCGGC CGACGACGGC 
ACGGTGGGCG TGTTCATCGG CGGCAGCCAG GCGCTGGTGC TGGGCGGCAA GGCCAGCGAG 
GTACTCATCG CCGAATCGCA GCAATTCCCG GGCAGCCAGC TCACGCAGCT ATTCTTCAAG 
CCCGCGGGCG GTTCGCCCGT GGAGCTGAAC GAGGGCATGC TGGGCGGTGG CGAAGTGGCC 
GGCCTGCTGC GTTTTGCCAA CCAGGACCTG GCCGAGGGGC GCAACCTGCT GGGGCGCATG 
GCGCTGGCCA TCGGCCGGAC GATGAACTAC CAACAGGGCA TGGGCCTGAC ACTTGACGGA 
CAGGCCGGCA AGCCACTGTT CTCCGAACCC GATAAGGCGC CGGGCTATAC CAGCGGAACG 
GCACAAGGAT TCATCGATTT TCAAACGCCT TTGGGCACCT CCGAGTTCGC CGCATCGGAC 
TACGAGGTGC GGTTTACGGG GGGACCCACT CCCACTGGCG AGGTTCCAGG GCAAATCATT 
CGGCTATCCG ACGGCAAGAC CATCAACGTA GCGAATCTGA TGGCCTCAGC GGGTACACAA 
ATGGACGGGC TAACCTTCAA GTTCAGCACC GCGGGCGCCG TCAACGAGCG CGTGCTATTC 
AAGCCCTTTG CCAGCGCCGC GGCCAACATA CAGGCACTGG TGTACTCGCC GCGCGAGCTG 
GCCGCGGCAA ACCCCATCAG TTCGGCCATG GGCACCTCCA ACGCGGGCTC GCTGCAACTG 
GCGGAACTGA AGGCCACTGG CCAGCATTGG GATGCGACTG CAGGCAAGGT GGTTGCCACT 
GGCGTGCTCA ATCTCCCACC CGCTGGAGGG GTGCAGCTCA CGTACCGCGA CGGGCCACCC 
TCAGGATTTG TCATCACGGG TACCAATGAT CAGCCGCTGA ACCTTCCTCC GCCAGCACCC 
TACACCCCGG GTACGACCGT CGTTCCCTAT GTGCCAGGAG AGCCGATTCG GATCGACGGC 
TGGTCCATCA CTCTGCAGGG CACCCCCAAG GACGGGGACA CGGTAACCGT TGGGGATGCC 
AAGCTCAGTG GCGACTGGTA CACCCGCAAC GCCGGCAACG CATCGGCCCT CATGGCGCTG 
CGCGACGTGA AGATGTTCGA CGAGTCCACG CTGTCCGACG GCTACGCCGG GCTGATGGCC 
CAGGTGGGCA CGCGCACGCA GAGCGCCCAG TACGCGGCCA AGCTCTCGGA CTCCATCGCC 
AGCAATCTGG AAGCCAGCCG CACGGCCGTC TCCGGTGTGA ACCTGGACGA GGAGGCCGCG 
CGGCTCATCC AATACCAGCA GGCCTACCAG GCATCCGCCA AGATGCTGCA GATTGCGCAG 
AACATTTTCG ACAACCTGAT CCAGACCATG GGCCGCTGA 

 

Protein sequence

MSLLNVGARA LLANQVALQT TGHNIANVST AGYSRQNVAM ETVQGQFTGS GYIGNGVQVA 
TILRNHNELL TRQAAAAQAV QAGDTVRAER LGQLQDVFQG GTSGLGAAIT DMLNSLADVV 
SSPTDITART VTLTRMDEMA ARMRSSAEQL QEIAYSVNEQ LQNDATRVNS LAKSIADVNE 
QIARVKGNGQ TPNDLLDKRD QLIRELNQFI QTTQIPADDG TVGVFIGGSQ ALVLGGKASE 
VLIAESQQFP GSQLTQLFFK PAGGSPVELN EGMLGGGEVA GLLRFANQDL AEGRNLLGRM 
ALAIGRTMNY QQGMGLTLDG QAGKPLFSEP DKAPGYTSGT AQGFIDFQTP LGTSEFAASD 
YEVRFTGGPT PTGEVPGQII RLSDGKTINV ANLMASAGTQ MDGLTFKFST AGAVNERVLF 
KPFASAAANI QALVYSPREL AAANPISSAM GTSNAGSLQL AELKATGQHW DATAGKVVAT 
GVLNLPPAGG VQLTYRDGPP SGFVITGTND QPLNLPPPAP YTPGTTVVPY VPGEPIRIDG 
WSITLQGTPK DGDTVTVGDA KLSGDWYTRN AGNASALMAL RDVKMFDEST LSDGYAGLMA 
QVGTRTQSAQ YAAKLSDSIA SNLEASRTAV SGVNLDEEAA RLIQYQQAYQ ASAKMLQIAQ 
NIFDNLIQTM GR