| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3109 |
|---|
| Symbol | |
|---|
| ID | 7383332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3318576 |
|---|
| End bp | 3319520 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643656425 |
|---|
| Product | flagellar rod assembly protein/muramidase FlgJ |
|---|
| Protein accession | YP_002554542 |
|---|
| Protein GI | 222112278 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.146328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTT CGCTCCCCAA TGCAGGCGCA ACGTCCGTAC GCCAGGCGCT GGCCGTGGAC
GGCCGCGCAC TCAACAGCCT CAAGGCGCAA GCCAGCCAGG GCGACGCCCA GGCCACCAAG
GACGCCACGC TGGAGGCGGC CAAACAGCTC GAATCCCTGT TCATGCGCGA GCTCATCAAG
AGCATGCGCG AGGCCACGAT GAAGTCCGGC CTGCTGGAGG GCGCCGAGGG CAACCTGGCC
AGCGACCTGT TCGACCAGCA GCTGTCGGTG CAGATGGCGG GTCAGCCCGG TGGGCTGGCC
GAGGCCATCC AGCGCCAGCT CTCGCGCCAG TTGGGCGGCG ACGGCCAGAC CACGCTGGTG
CCGGGCTCCA CGCTGAGCAT GGACGTCGCG CTGCGCAAGG CCGCGCCTGC CGACAATCCG
CGCGCGGCGT CGCCCAAGGG CCGTGACGAC TTCGTACAGC ACCACCGCGC GGCGGCCGAG
CGCGTGGCGC GCAGCAGCGG CATTCCCGCC AGCTTCATGC TGGGCCAGGC CGGGCACGAG
ACGGGCTGGG GCAAGGGCGA GATCCGCCAC AAGGACGGCA GCAACTCCTT CAACCTGTTC
GGCATCAAGG CCGGCAAGGG CTGGACCGGG AAGGTGGCCG AGGTGACCAC CACCGAATAC
ATCAACGGCG CGCCGCGCAA GGTGGTCGCC AAGTTCCGCG CCTACGACTC GTTCGAGGAG
TCGTTCCGCG ACTACGCACG CCTGATCAAC GACAACCCGC GCTACGAAAA GGCGCGCGAG
AAGACCCATT CCGCCGTCGC CTACGCCACG GAGCTGCAGA AGGCCGGCTA CGCCACCGAT
CCGCAATACG CCGCCAAGCT CAGCCGCGCC ATCCAGAGCA CGCTGGGCGT GGCGCGCACC
CCCAGCGCGC CCGTGCTGGC CCAGGCATCC GGCACGCAGG CCTGA
|
|---|
| Protein sequence | MSLSLPNAGA TSVRQALAVD GRALNSLKAQ ASQGDAQATK DATLEAAKQL ESLFMRELIK
SMREATMKSG LLEGAEGNLA SDLFDQQLSV QMAGQPGGLA EAIQRQLSRQ LGGDGQTTLV
PGSTLSMDVA LRKAAPADNP RAASPKGRDD FVQHHRAAAE RVARSSGIPA SFMLGQAGHE
TGWGKGEIRH KDGSNSFNLF GIKAGKGWTG KVAEVTTTEY INGAPRKVVA KFRAYDSFEE
SFRDYARLIN DNPRYEKARE KTHSAVAYAT ELQKAGYATD PQYAAKLSRA IQSTLGVART
PSAPVLAQAS GTQA
|
|---|
| |