| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3094 |
|---|
| Symbol | |
|---|
| ID | 7383317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3305657 |
|---|
| End bp | 3307249 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643656410 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_002554527 |
|---|
| Protein GI | 222112263 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1419] Flagellar GTP-binding protein |
|---|
| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA AACGCTTTAC CGCTCCCACC GCACGGGAGG CCCTGGCCAA GGCGCGCATG
GCCTTCGGTG AAGGCACGCT GATCCTGTCC AACCGCCCCA CGGCGGGCGG CGTCGAGGTG
GTGGCCACGG CCGAGGACGC GCTGTCGTCC CTGCACGGCG GTGCCGAGCC GGCACCCAAC
CGTCTGCAGG AGCGCGCCGA CGACCTGGCC GCGAGCCAGC CGGTGCGCAT GTCCCAGACG
CAGCCCCATG CAGCCCCTGT CCCGCAGCCC GCACGCCAGC CGGAGCCCGC GGCACGCAGC
ACCGTGGCGC ACGACACCGA GCAACTGGCC ATGAGCACGC TGTCGTTCCA GGACTATGTG
CGCGAGCGCA TGCTGCGCCG TCGCCACGAG GCCTTGCACG GCACAAGCGC CCCCGCGCCC
CTGAACGAGC GCGCCGCGCT GGAGCGCGGT CTGCCCGAGC CACGCTTCGA ACCCCGCGCT
GAGCGCCTGC CCGAGCCACC CGCGCCACAG CCCGTGAATG CCCCGGTGGC ACGCCACAAC
CCATTGCGGC CCATGCATGC CGCCCTGGGC GCCGAGCAGC TCACGCCGCG CCGCGCCGAG
GCGCCCGCCA CAGCCGCGCC CACGCTGGCG GCCGGCCTGG GACAGCAGAA CCTCATGAAG
GAACTGCAGT CCATGAAGGA GCTGATCGAG GACCGCTTCA ACACCCTGGC CTGGCTGGGC
CAGGCCCGCC AGAACCCGAT CCAGTCCACG CTGATGCTCA AGCTCATCCG TGCGGGCTAT
TCGCCCGCCC TCTCGCGCGC GGTGCTGGAA CACCTGCCCG AGCATCTGGG CGCCCAGGAC
GCCGTGCGCT GGCTCATGGA AGTGCTGGAG CGCAACCTGC GCACCGACGC GCAGACGCTG
CCGCTGTACG AGGAAGGCGG CATCTTCGCC ATGGTGGGCG CCACCGGCGT GGGCAAGACC
ACCACCACCG CCAAGCTGGC CGCCTTGTGC GCGCGCATCC ACGGCCCCGC CAGCGTGGGC
CTGATCACGC TGGACACCTA CCGCGTGGGC GCGCACGAGC AGTTGCGCTC CTACGGCCGC
ATGCTGGGCG TGGTGGCGCA CCTGGCGCAC GACCGCGCGG CGCTGCAGGA CCTGCTGGGC
CTGCTGTCGT CCAAGAAGAT GGTGCTCATC GACACCACGG GGGTGGCCCC GCGCGACCCG
CGCAAGCGCG ACCTGCTGGA CGTGCTGGCG CTGCCCGGTG TCAAGCGCCT GCTGGTGCTC
AACGCCAGCA GCCACGGCGA TACGCTGGAC GACGTGCTCA CCGGCTTCAA GACCACCGGC
TCGCAGCAGG CCATCCTGTC CAAGGTGGAC GAGGCCGTGA AGCTGGGCCC CGCCATTGAT
GCGCTGATCC GCCACCAGAT GGTGCTGCGC GGCGTGACCA ACGGCCAGCG CGTGCCCGAG
GACTGGGAAG CGGCCGACGC CCGCAAGCTC GTGAGCGCCT CCATGCGCAC GAGCGTGAAG
TCGGCCTTCG ACCCCAAGGC CGCCGAGTTG AACTTCTTCT TCTCGCACGC CACGGAAACG
GCCGATGAGC GGGGGATGGC CGATGTTGCT TGA
|
|---|
| Protein sequence | MNIKRFTAPT AREALAKARM AFGEGTLILS NRPTAGGVEV VATAEDALSS LHGGAEPAPN
RLQERADDLA ASQPVRMSQT QPHAAPVPQP ARQPEPAARS TVAHDTEQLA MSTLSFQDYV
RERMLRRRHE ALHGTSAPAP LNERAALERG LPEPRFEPRA ERLPEPPAPQ PVNAPVARHN
PLRPMHAALG AEQLTPRRAE APATAAPTLA AGLGQQNLMK ELQSMKELIE DRFNTLAWLG
QARQNPIQST LMLKLIRAGY SPALSRAVLE HLPEHLGAQD AVRWLMEVLE RNLRTDAQTL
PLYEEGGIFA MVGATGVGKT TTTAKLAALC ARIHGPASVG LITLDTYRVG AHEQLRSYGR
MLGVVAHLAH DRAALQDLLG LLSSKKMVLI DTTGVAPRDP RKRDLLDVLA LPGVKRLLVL
NASSHGDTLD DVLTGFKTTG SQQAILSKVD EAVKLGPAID ALIRHQMVLR GVTNGQRVPE
DWEAADARKL VSASMRTSVK SAFDPKAAEL NFFFSHATET ADERGMADVA
|
|---|
| |