| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3092 |
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| Symbol | |
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| ID | 7383315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3302407 |
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| End bp | 3303579 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656408 |
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| Product | type III secretion exporter |
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| Protein accession | YP_002554525 |
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| Protein GI | 222112261 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.677478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGA GCCAAGACAA AAACCTCCCA GCAACCGAGC GCAAGCTCCA GAAAGCGCGC
AGCGACGGCC AGGCCGCGCG CTCGCGGGAC CTGTCGCACC TGGCCATCCT GGGCATGGGC
GCGCTGGCGC TGCTGGTGCT CGCGCCCTGG TTCGTGGAAT ACCTGCAGCG CGCGATGCGC
CAGCAGCTCG CATTCAACGC GGCCACCGTG CAGGCGCCCG GCCACATGCT GGAGCGCCTG
CAGACCATGG CGGGCGTGGG CCTGCTGGCC AGCGCCAGCT TCGCCGCGCT CACCGGCGGC
GCGGCGCTGC TGAGCGCCGT GGGCGCCGGC GGCTGGGTGT TCAGCTTCAA GCCCATCACG
CCGCAGTTCA ACCGGCTCAA CCCGCTGACC GGCTTCACCA ACCTGTTTTC CAAGCAGCAG
CTCGCCAACG TGAGCAAGAT GGTGCTCATG ACCGGCATCC TGTCGTTCGT GGCCTGGAAC
TTCATGGGCC AGAGCATCGA GAAGATGGCC GCGCTGGTGC TGCAGCCTTC GCCCCTGTCG
CTGCGCCACG TGGGCGACTG GATCGTCTCG GGCACCAGCC TGCTGCTGCT GGTGGTGTTC
CTGTTCGCCG TGGTGGATGT GCCGCTGCAG GCGTTCTTCT TCAAGTCGCG CCTGAAGATG
TCGCACGAGG AAGTCAAGCA GGAGCACAAG GAATCCGACG GCAATCCGCA GCTCAAGGGC
CGCCAGCGCC AGCGCGCGCG CGAGATCGCC GACGGCGCCA GCATCACCGC CGTGCCCAAG
GCCGACTTCG TGGTCATGAA CCCCACGCAC TACGCCGTGG CCCTGAAGTA CGACGACGCC
ACCATGGGCG CACCCCAGGT CGTCTCCAAG GGCACCGACC TGCTGGCCTT CAAGATCCGC
GAAGTGGCCC AGGCGCATGG CGTGCCCGTG CTGCAGTCGC CCATGCTGGC GCGCGCGCTG
TATGCGCACG CCGAGCTGGA GCAACCGATT CCCGCACAGC TGTACACCGC CGTGGCCCAG
GTGCTGGCCT ACGTGTATCG CCTGAAGGCC GCGCTGCGCG GCGATGGCCG CATGCCCGAG
GCCCAGCCCG ATCCCTACGT GCCGCCCGAG CTCGACCCCC ACAGCGCCCA CCACACCCTG
CGCCCCGCAC CCGCCACAGG TAACGCAAGA TGA
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| Protein sequence | MSSSQDKNLP ATERKLQKAR SDGQAARSRD LSHLAILGMG ALALLVLAPW FVEYLQRAMR
QQLAFNAATV QAPGHMLERL QTMAGVGLLA SASFAALTGG AALLSAVGAG GWVFSFKPIT
PQFNRLNPLT GFTNLFSKQQ LANVSKMVLM TGILSFVAWN FMGQSIEKMA ALVLQPSPLS
LRHVGDWIVS GTSLLLLVVF LFAVVDVPLQ AFFFKSRLKM SHEEVKQEHK ESDGNPQLKG
RQRQRAREIA DGASITAVPK ADFVVMNPTH YAVALKYDDA TMGAPQVVSK GTDLLAFKIR
EVAQAHGVPV LQSPMLARAL YAHAELEQPI PAQLYTAVAQ VLAYVYRLKA ALRGDGRMPE
AQPDPYVPPE LDPHSAHHTL RPAPATGNAR
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