Gene Dtpsy_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3082 
Symbol 
ID7383305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3292795 
End bp3293106 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content64% 
IMG OID643656398 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_002554515 
Protein GI222112251 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.507912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGC GCATCAACAG CACCCAGTTT CCCCTCACCG GCACCCAGGT GGCGCGCCGC 
GTCACCGCGC CGCAGGAAGG CGTGCAGGAG GCCGGCTTTT CCTCGGCGTT CAAGAACGCG
CTGCAGTCCG TGAGCGCCGC GCAGGACCAG GCCAGCGGCC TGCAACGCGA AGTGCAACTG
GAAAACCCCA ACGTCAGCAT CGAGGAAACC ATGGTCGCCA TGCAGAAGGC GCAGATCGGC
TTCCAGGCCA CGCTGCATGT GCGCAACCGC ATGGTGCAGG CCTACACCGA CATCATGAAC
ATGCAAGTGT AA
 
Protein sequence
MDLRINSTQF PLTGTQVARR VTAPQEGVQE AGFSSAFKNA LQSVSAAQDQ ASGLQREVQL 
ENPNVSIEET MVAMQKAQIG FQATLHVRNR MVQAYTDIMN MQV