| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3081 |
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| Symbol | |
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| ID | 7383304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3290927 |
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| End bp | 3292621 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656397 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002554514 |
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| Protein GI | 222112250 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.321176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAG TTGCCGAAGT TCCCGTCGCT CCGCCTCCCG TCGCCAGCCC TGGCTGGCCG
CAGCGGCTGG CCTCGCTCGA CCGTGCCGCA CGCCTGCGCC TGGGGGTGGT GGCAGCGCTG
CTGGTCGCGG CGCTGCTGGC CGCATTCTTC TACAGCCGCC AGCCCGACTA CCGGGTGCTG
TTCTCCGGCC TGAACGACAA GGACGGCGGC GCCATCGTGG CGCAGCTGTC GCAGATGAAT
GTGCCTTACA AGTACACCGA AGGGGGCGGT GCCATCCTCG TGCCGGCCGA GCGCGTGCAC
GACGTGCGCC TGCGCCTGGC CACGCAGGGC CTGCCCAAGG GATCGGTGAC CGGGTTCGAG
CTGATGGAGA CCAACCGCTT CGGTGTCACC CAGTTCCAGG AGCGCCTGAA CTTCCAGCGC
GGGCTGGAGG GGGAGCTGAC GCGCTCGATC CAGGCGCTGG CCTCGGTGCA GAGCGCACGC
GTGCACCTGG CGCTGCCACA GCAAAACGGT TTCTTCCGCG AGCAGCAAAA GCCCTCGGCC
TCGGTGTTGC TCAGCCTGTA CCCCGGGCGC TTCCTGGACC GCGCGCAGCT CGCAGGCATC
GTGCACCTGG TGGCCTCCAG CGTGCCGGAA CTCGCTCCCT CAGCCGTGAG CGTGCTGGAC
GATACCGGCA AGCTGCTGTC GCAGACGCCC GACATGGCCG GCGCCGGCGT GGACGCGCAG
CAACTGGCCT ATGTGCAGCA GATCGAGCAG CAGTACGCGC GCCGCATCCT GGACCTGCTG
GAGCCCGTCG TGGGCAAGAA CAACGTGAAG GCCCAGGTGA CCGCCGAAGT GGACTTCAAC
CAGACCGAGT CCACCGTCGA GCAGCACAAG CCCAACCTGG CGCCCGATGC CAGCGCCGTG
CGCAGCCAGC AGGTGGTGGA AAGCGGCGGC ACGCCCGGCG CGCAGCCACC CACGGGCGTG
CCTGGCGCGG TGACCAACCA GCCACCGCAG GCCTCTGCGG CTCCCATCAA CGGTGCCAAC
CCCGCACCCA CGGCGGCCGG TGGCGCGCCG GGCAGCGGCG CTGCGGGCCA GGCCAAGCGC
GAGTCCATCA CCAACTATGA GGTGGACAAG ACCACCCAGG TGACGCGCGG CGGCGCCGGC
GCCATCAAGC GTGTGAACGC AGCCGTGGTG GTGAATTACC AGCCCGTGAG CGAAGGGCCG
GGCAAGCCCG CGGTGAACAA GGCGCTGACG CCTGAACAGC TGGAGCAGAT GACGGCGCTG
GTGCGCGAGA CGATCGGCTT CAACAAGGAG CGCGGCGATT CCGTCAACCT CATGAATGCC
CCCTTCCTGG TGGAGGAGGT CCCCCCGGGC GAACTGCCGC TGTGGAAGCA GCCCGAAACG
ATCGAGTTGG CCAAGACGCT GGGCTGGCCG CTGGGCATCT CGCTGGCCGC GGCCATCCTG
CTGCTGGGGC TGCTGCGCCC GGCGCTCAAG GCCCGCGCCC GCGCCGTGCA GATGGCGGCG
CAGCAGCCGG CGGGGGCGCA GCTGAGTGCC ATCGCCTCCG AAGAACTGCA GCGCCCCGGC
CTGCCGGCGC CTGCGCAACC CGAAGAGCTG CAGCCCACGG CGGAACAACT GCGCCTGGAA
GAGGCGCGCC AACTGGCCCG CGACAACCCC GTCGCCGTGG CCAGCATCCT CAAAACCTGG
GTCAATGGCG ACTGA
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| Protein sequence | MSAVAEVPVA PPPVASPGWP QRLASLDRAA RLRLGVVAAL LVAALLAAFF YSRQPDYRVL
FSGLNDKDGG AIVAQLSQMN VPYKYTEGGG AILVPAERVH DVRLRLATQG LPKGSVTGFE
LMETNRFGVT QFQERLNFQR GLEGELTRSI QALASVQSAR VHLALPQQNG FFREQQKPSA
SVLLSLYPGR FLDRAQLAGI VHLVASSVPE LAPSAVSVLD DTGKLLSQTP DMAGAGVDAQ
QLAYVQQIEQ QYARRILDLL EPVVGKNNVK AQVTAEVDFN QTESTVEQHK PNLAPDASAV
RSQQVVESGG TPGAQPPTGV PGAVTNQPPQ ASAAPINGAN PAPTAAGGAP GSGAAGQAKR
ESITNYEVDK TTQVTRGGAG AIKRVNAAVV VNYQPVSEGP GKPAVNKALT PEQLEQMTAL
VRETIGFNKE RGDSVNLMNA PFLVEEVPPG ELPLWKQPET IELAKTLGWP LGISLAAAIL
LLGLLRPALK ARARAVQMAA QQPAGAQLSA IASEELQRPG LPAPAQPEEL QPTAEQLRLE
EARQLARDNP VAVASILKTW VNGD
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