| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3048 |
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| Symbol | |
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| ID | 7383265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3252988 |
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| End bp | 3255039 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643656358 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002554481 |
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| Protein GI | 222112217 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGC CTGTGGCCTC GCTCCGCCTA CCGGCGCCTG CCCGCGCGTG GTGGGCGCTC
GGGTTGCTTG TCGCCCTGCT GTTTGCGGCG ATTGGCTGGG GGGTGCATGC CATCTACCAG
GCGCGTGAGC AACGCTACCG CCATCAGATC GAAGGCGGCC TGCAGGCCGT GAACCACATG
CAGGTGCGGG GGGTGACGGA CTGGCGGCGC CGGCGCTTGC AGGAGGCGGC GGCACTCACC
GACGACCGCC TTCTGGCACA GGCCGTGGCC CGCTGGCGCG CAACGGCGGC GCCTGACGCC
GAACAGGCGG TGCGTGAGCG GTTGCGCATC CTGGTCGAGC ATGTGCGCTA TACCGCTGCC
TATTTCGTCG ATCCGCAGGG CCGGCTGATC CTGGATGCCG GCGGGCCGGC CACGGGCACG
CTGCAGCCAC CCGAGATGCG CGCGCTGGAG GGCGCGCTGG CGCGGGCCGA GCCCGGCGTT
GTCGAGCTGC GCCGCGACCC GGCCTTCGCC TTTCCGTTCT TCGGATTGCT GGCGCCGCTG
TACGACGGAA CCGCGTCGCT GGGGGCCATC TGGCTGGTGA TGGATGCGCG CACCACGCTC
TACCCATTGC TGGAGACCTG GCCCACCAGC AGCCGCACCG CCGAATCGGT GCTGGTGGAG
CGGCAGGACG ACACGGCCTT GTTCCTCAGC CCCCTGCGCC ATCGCAGCGA TGAACCACTG
GCGCTGCGCC TTCCGGCGGA GCCGGGCAGC CGTGATCCCA TGGTGCTGGC CGTCGCGGGC
GTGCGGGGCG CCTTCTACGG CAGCGACTAT CGCAACCAGC CGGTGCTGGC GGTGGCCAGC
GCGGTGCCGG ACTCGCCCTG GCTGCTGGTG TCCAAGGTGG ACGTGGCCGA CGCCTTCACC
GCTGCCCAGC GGCGCGAATG GCTGGCCCTG AGCCTGTTCG TCAGCCTGGG GCTGCTGTCG
CTGGGCTGCG TCGTGGTGCT GTGGCAGGGG CGGGCCTGGC GGCGCGAACG GGCGTTGAAG
GCGGAGCTGG AGCGCAACCT GCGCTGGCTG GACAACGCGC AGAAAGCCGC CTCGGTGGGC
TACTTCGTCT ATGAGGGGCA GAGCGAGGCA TTCATCATGT CGCGCATGGC CAGCGCTATC
TTCGGCCTGC CATCCGACGG GCGCATGACG CTGCGCCAGT GGGTGGGGAT GCTGCACCCC
GACGAGCGCG CGCAGACCCT GGAGATCCAC GGCCGTGCCA TGAGCGAGCG CATTCCGCTG
CGCACCCAGT ACCGCATCCA ACGCAACGGC GACGGCCAGG TGCGCTGGAT CGAGGTGTGG
GGCGAGTACG GCGACTCCGC CGGCGACGGC GAGCCGCTGC TCATGACCGG CACCGTGCAG
GACATCACCG ACCGCAAGCA CACCGAGGAC GAACTCGCGC GTTACCGCAA CGCGCTGGAG
TCGCAGGTGC GCATGGACCC GCTCACCCAG GTGGCCAACC GCCTGGCGCT GGACGAGGCC
GTGGCGCGCG CCTGGAGCCA GGCGCTGCGC GAGGGTTCGT CGCTGGCGCT GCTGATGATC
GACGTGGACC ATTTCAAGGC CTACAACGAC TATTACGGCC ACGTGGCGGG CGACCGCTGC
CTGCAGCGCG TAGCGTCGGC GCTGGCGTCG GCCTTGGGGC GGCCGGGTGA CCTGCTGGCG
CGCTATGGAG GCGAGGAATT CGCCGTGCTG CTGCCGGGCG CGGACGCCGA TGCTGCCCTG
GCCGTGGCGC ACCGCCTGCA GGAGGTGCTA CGCGCCCTGT CGCTGGAGCA CCGCGCCAAC
CCGGGCGGAT TCACCGTCAC CGCAAGCATG GGCCTGGCCC ACCTGCGTCC GGCCGACGTC
GTGTCCGCAG GCACCGAAAC GCGCGCCGGC GTGGACGCGG CCCAGCCCCT GTTCCAGCAG
GCAGACGCCG CGCTGTACCG CGCCAAACAG CTGGGCCGCG ACCGCGTGGT GAGCTACGAC
GCGCAGTGCG CGGCTACCCT GTACGAGGCC GGGCAGCCCG CGCCTGCGAT CATGCTGACC
TATGACATTT GA
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| Protein sequence | MTSPVASLRL PAPARAWWAL GLLVALLFAA IGWGVHAIYQ AREQRYRHQI EGGLQAVNHM
QVRGVTDWRR RRLQEAAALT DDRLLAQAVA RWRATAAPDA EQAVRERLRI LVEHVRYTAA
YFVDPQGRLI LDAGGPATGT LQPPEMRALE GALARAEPGV VELRRDPAFA FPFFGLLAPL
YDGTASLGAI WLVMDARTTL YPLLETWPTS SRTAESVLVE RQDDTALFLS PLRHRSDEPL
ALRLPAEPGS RDPMVLAVAG VRGAFYGSDY RNQPVLAVAS AVPDSPWLLV SKVDVADAFT
AAQRREWLAL SLFVSLGLLS LGCVVVLWQG RAWRRERALK AELERNLRWL DNAQKAASVG
YFVYEGQSEA FIMSRMASAI FGLPSDGRMT LRQWVGMLHP DERAQTLEIH GRAMSERIPL
RTQYRIQRNG DGQVRWIEVW GEYGDSAGDG EPLLMTGTVQ DITDRKHTED ELARYRNALE
SQVRMDPLTQ VANRLALDEA VARAWSQALR EGSSLALLMI DVDHFKAYND YYGHVAGDRC
LQRVASALAS ALGRPGDLLA RYGGEEFAVL LPGADADAAL AVAHRLQEVL RALSLEHRAN
PGGFTVTASM GLAHLRPADV VSAGTETRAG VDAAQPLFQQ ADAALYRAKQ LGRDRVVSYD
AQCAATLYEA GQPAPAIMLT YDI
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