Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3037 |
Symbol | |
ID | 7385483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3240206 |
End bp | 3241726 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643656347 |
Product | 7TM domain sensor diguanylate cyclase |
Protein accession | YP_002554470 |
Protein GI | 222112206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGC GCGGGGCCAC ACCGGCCTAC CACTGGTTCA AAGTGGTCCT GGAGCAGCGC GCGGCCAGCG GCGACTGGGT GCTGGCCACC CAGACCACGT CTTTGCAGGA CGTGCGGTTC TACGGCCCGT TCGATGCGTC GGGTACGGCG CTTGCGCCGC CAGTGCATAC GGGCCTGGCG CAGCCCTTCG CCACGCGGCC CCTGGGCAGC GAGCGCTACC TCATGCGCCT GCAGCCCCCG GGCCCGGGCA CCTACACGGT CTACGCCCGG CTGTACAGCG AGACGGCGCC GTCCTTCGAC CTGTCCGTCT GGGACACGGC CGAATACCTG CAATGGCGCC AGCACAAGCG GCTGTTCGAC GGCATCTGCT ACGGCATCCT GATCGCACTG CTGGTCTACA ACCTCACGCT CGTGGGCGTC TTTCGGGACA CCACGTACAC CTTCCACGTC GGCCAGTGCA TCTTCGCGCT GTTGACGCTG GCCACCTTCA ACGGCCACAC GGCCCATTAC CTGTGGGGCG ACGCGCCGTG GTGGCAGGAG CGCAGCTATT TCGTATTGCC CAGCCTGTGG CTGTTCTTCG GCGCGCTGTT CACGCGCAGT TTCCTGGACA CCCGGCAGAC GCCCTTGATG GACGGAGTGC TGGTGGCAAT CGGCCTGCTG GCGGCGCTCA CCGCCGTGCT CGGCGGGCTC GGGCAATTTG CCATCGCCCA GACGCAGAAC GAACTGCTGG CCAGCGCCGG CATCGCGGCC GCGTCGCTCG CGGCCATTCT GGTGCTGCGC CGGGGCTTCA CGCCCGCGCG CTGGTACCTG GGCGCGCAGG CGCTGCTGTT CGTCACGGTG GCCGGCGTGG TGCTGAGCAA CTGGAAGGTG ATCGACGCGC CCTTCATGCT CGCCAACGGC CTGCAGATCG GCGTGGCGGC CGAGATGGTG GTGTTCGCCG TTGCGTTGAG CACCCGCATC GACAGCCTGA ACGCCTCCCA GATCGCCCTG CGGCTGCGCG CGGACCATCT GGCCAAGGCC GCGACCACCG ACCCTCTCAC GGGCCTGACC AACCGCATGG GGCTGACCCA GGGCGCAACG CAACTGCTGT CGGAAGGGGG CACGCACGCC CTGCTGCTGC TCGACCTGGA CCGCTTCAAA CCCATCAACG ACACCTATGG CCATGACGCC GGCGACGAGG TGCTGCGCGC CGTTGCCACA CGGCTGCAGA CGCACACGCG GTCCGGCGAC ATCGTGGCCC GGCTGGGCGG CGACGAGTTC GTGGTCATGC TGGCCCACGC GCCCGCGGGC GACGCCCTGA CGGCGCTGGT CAAGCATCTG GAGCTGGCTA TCTGCCAGCC GGTGTACTTC CAGCACCAGG AACTGTGCGT GGGCGGCAGC ACGGGCGTTG CGCACAGCCC GCAGGACGGC CCCACGCTGA CGGAGCTGAT GCGCTGCGCC GACCAGCGCA TGTATCAGGC CAAGCAGGCG CACAAGGACG CGGCGCAGCA CCCGGCAGCG CCGGCTCTGC CGTTGGCCTG A
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Protein sequence | MPLRGATPAY HWFKVVLEQR AASGDWVLAT QTTSLQDVRF YGPFDASGTA LAPPVHTGLA QPFATRPLGS ERYLMRLQPP GPGTYTVYAR LYSETAPSFD LSVWDTAEYL QWRQHKRLFD GICYGILIAL LVYNLTLVGV FRDTTYTFHV GQCIFALLTL ATFNGHTAHY LWGDAPWWQE RSYFVLPSLW LFFGALFTRS FLDTRQTPLM DGVLVAIGLL AALTAVLGGL GQFAIAQTQN ELLASAGIAA ASLAAILVLR RGFTPARWYL GAQALLFVTV AGVVLSNWKV IDAPFMLANG LQIGVAAEMV VFAVALSTRI DSLNASQIAL RLRADHLAKA ATTDPLTGLT NRMGLTQGAT QLLSEGGTHA LLLLDLDRFK PINDTYGHDA GDEVLRAVAT RLQTHTRSGD IVARLGGDEF VVMLAHAPAG DALTALVKHL ELAICQPVYF QHQELCVGGS TGVAHSPQDG PTLTELMRCA DQRMYQAKQA HKDAAQHPAA PALPLA
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