| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3029 |
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| Symbol | |
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| ID | 7385475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3232297 |
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| End bp | 3233409 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643656339 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002554462 |
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| Protein GI | 222112198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.518701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCAT GGCATAAATG GGGGGCCGCC CTGGTCCTGG GCGCAACGCT GGGCGCAAGC
CATGCACAGA TCCTGGTGGG GCAAACGGCC GGGTTCTCCG GCCAGGTGGC CGCAGGAGTG
CAGGAGACCA CGCAGGGCGC CAAGCTGTTC CTGGACGCGG TCAATGGCAA GGGCGGCGTG
CACGGGCAGA AGATCGAACT GATCTCGATG GACGACAAGT TCGACCCCAA AACCGCCGGC
GAGAACGCGC GCACGCTGAT CGAGGACAAG AACGTGCATG TCATGTTCCT CACGCGCGGC
ACGCCCCACA CCGAATCCAT GATCCCGCAC CTGGACAAGC ATGGCGTGGC CCTGGTGGGC
CCGTCCACGG GCGCCATGGT GCTGCACCAG CCGGTGCGCA AGCACATCTT CAACGTGCGC
GCCACCTACC AGCGCGAGGC CGAGAAGGCC ATGACCCACC TGGCCTCGAT GGGCATCACG
CGCATCGCCG TGCTGTATGC GGACGACAGC TTCGGCGCCG ATGGCGTGAC GGGCGCGCAA
AAAGGCCTGG CCCAGGCCAA GCTGCAGCCC GTGGTGCTGG AGAAGTTCAA TCGCGCCAAG
CCGGACTTCA CCCCGCTGGT GGCCAAGGTC TCCCAGGCGC AGGCCCAGGC CGTCCTGATG
GTCGCCTCGG GCACCTCGGT GGTGGATGGC TACAACGCGC TGCGCCAGGC GGGCTCCACG
GCACAGGTGG TCACGCTGTC CAACAATGCC TCGGGCGGCT TCATCAAGAG CCTGGGCGAA
AATGCCCGCG GCGTGATCGT CACGCAGGTC TACCCGAACG AACGCAGCCT GACCTTCCCG
CTGGTCAAGG AAGCCATCGA CCTGGCCAAG GCCAAGGGAA TGACCGAGGT CAGCCCGGCC
ATGCTCGAAG GCTTCGCCGC CGCCAAGGTG CTGGTCGAAG GCCTGCGCCG CGCTGGCCCG
AAGCCGTCGC GCGAGAAGAT TCAGACGGCC CTGGAATCCA TCCAGAAGTT CGATCTGGGC
GGGCTGGACA TCTCCTACGG CCCCGACGAT CACACGGGCC TGGACTTCGC CGATCTTTCC
ATCATCGGCA CGGACGGCAA GTTCCGCCGC TGA
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| Protein sequence | MQPWHKWGAA LVLGATLGAS HAQILVGQTA GFSGQVAAGV QETTQGAKLF LDAVNGKGGV
HGQKIELISM DDKFDPKTAG ENARTLIEDK NVHVMFLTRG TPHTESMIPH LDKHGVALVG
PSTGAMVLHQ PVRKHIFNVR ATYQREAEKA MTHLASMGIT RIAVLYADDS FGADGVTGAQ
KGLAQAKLQP VVLEKFNRAK PDFTPLVAKV SQAQAQAVLM VASGTSVVDG YNALRQAGST
AQVVTLSNNA SGGFIKSLGE NARGVIVTQV YPNERSLTFP LVKEAIDLAK AKGMTEVSPA
MLEGFAAAKV LVEGLRRAGP KPSREKIQTA LESIQKFDLG GLDISYGPDD HTGLDFADLS
IIGTDGKFRR
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