Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3002 |
Symbol | |
ID | 7385447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3197944 |
End bp | 3198744 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643656312 |
Product | RNA-binding S4 domain protein |
Protein accession | YP_002554435 |
Protein GI | 222112171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAGT CCAGCCATCC AACGGACGCG GTGCGCCTGT CCAAGCGCGT GGCGCAGCAG TTCCAGTGCT CGCGCACCAC GGCAGAGCAG TACATCGAGG GCGGATGGGT GTCGGTGGAC GGCCAGGTGG TCGAGCTGCC CGGTGCGCGC GTGGCGTCCG CGCAAAGCGT GGTGCTGGCG CCAGACGCCA ATCTGATGGA GCTCACCCCC GTCACCCTGC TGCTGCACAA GCCGCCGGGC TACGAGGCGG GGCTAGGCCT GGTCACTGGC GCGACGCACG GCGCACCGGG CGCGCACGGC AGCCGCAGCC AGGGCGCGCC GCAAGCCGTC ACGCTGCTCA ACGCGCAGTC GCACCTGCCC GAAGACGCCG CCGGCACGCG CGTGCTGCTG CGCCATTTCA AACAGCTCGA ATGCTTCACG CCGCTGCCCA CCGAGGCCAG CGGCCTGGTG GTCTACACGC AGGACCGGCG CGTGGCCCGC AAACTGCAGG AAGACATCGA AACGCTGGAA CAGGAGTGCA TCGTGGAGGT GGCAGGCCAG ATCGCGGACG GCGGCCTGCA AAAGCTCTGC CACGGCCTGA GCTTCAACGG CCGACCGCTG CCGCCCATCA AGGTCAGCTG GCAAAGCGAG ACACGCCTGC GCTTCGCGCT CAAGGGCATC CGCCCCGGCC AGATCCCGGC CATGTGCGAA GCCGTGGGCC TGTCCGTGCG GGCCATCAAG CGCATCCGCA TCGGCCGCGT GCCGCTCGCC AAGGTGCCCC AGGGGCAGTG GCGCTACCTG CAACCGTGGG AGCGGTTCTG A
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Protein sequence | MTESSHPTDA VRLSKRVAQQ FQCSRTTAEQ YIEGGWVSVD GQVVELPGAR VASAQSVVLA PDANLMELTP VTLLLHKPPG YEAGLGLVTG ATHGAPGAHG SRSQGAPQAV TLLNAQSHLP EDAAGTRVLL RHFKQLECFT PLPTEASGLV VYTQDRRVAR KLQEDIETLE QECIVEVAGQ IADGGLQKLC HGLSFNGRPL PPIKVSWQSE TRLRFALKGI RPGQIPAMCE AVGLSVRAIK RIRIGRVPLA KVPQGQWRYL QPWERF
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