| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2998 |
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| Symbol | dapF |
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| ID | 7385443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3194658 |
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| End bp | 3195536 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643656308 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002554431 |
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| Protein GI | 222112167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATCC GCTTCACCAA GATGCAGGGC GCGGGCAACG ACTTCGTGGT ACTTGACGAG
ACGCAGGGAC GCCTGGGGCT CACGCCCGCG CAGTACCGCT TTCTGGCCGA CCGCCACTTC
GGCGTGGGCG CCGACCAGAT CCTCACCGTG CGCCCCTCGC CCGGCGCGGG CATCGACTTC
GAATACGTGA TCCACAACGC CGACGGCGGC CAGGTGGAGC AGTGCGGCAA CGGCGCACGC
TGCTTCGCGC GCTATGTGCG CGACAAGGGC CTCACCGCGC AGGACACGAT CCGCGTGCAG
ACCATGGCCG GCGTCATCGC CCCGCACCTG ACCGCCGACG GCCGTGTGAC GGTGGACATG
GGCCGCCCCG AGCTGGAGCC GGCGCGCGTG CCGTTCGACA CCACGGGCCT CGCGCCCGTG
TCGCAAGGTT CAGGCCAAAA ATGGCCTCTG GCGCTTGATG GACAGGCGTC AGAAGCTACG
CTATTAGTAG CAGTGGTGTC CATGGGCAAC CCGCACGCCG TCCAGTTGGT CGACGATGTG
GACACTGCCC CCGTGGCGCA GACCGGTCCC TTGATCGAAA GCCACCCGCG CTTTCCCCAG
CGCGTGAACG CGGGCTACCT GCAGATCGTG AACCGTGGTG AAGTGCGCCT GCGCGTGTAC
GAGCGCGGCG CGGGCGAGAC GCTGGCCTGC GGCACGGGCG CCTGCGCCGC CGTGGTGGCC
GGCATCCGCC TGGGGCTGTT GGATGCGCGC GTGCAGGTGC ACACGCGGGG CGGCCTGCTC
ACCATCGACT GGGCCGGCGG CTTGCAAGAC CCCGTGTTCA TGACCGGCCC CGCTACCACC
GTCTTCGAAG GCGAGATCGA CATTCCGGAC GCTTTATGA
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| Protein sequence | MHIRFTKMQG AGNDFVVLDE TQGRLGLTPA QYRFLADRHF GVGADQILTV RPSPGAGIDF
EYVIHNADGG QVEQCGNGAR CFARYVRDKG LTAQDTIRVQ TMAGVIAPHL TADGRVTVDM
GRPELEPARV PFDTTGLAPV SQGSGQKWPL ALDGQASEAT LLVAVVSMGN PHAVQLVDDV
DTAPVAQTGP LIESHPRFPQ RVNAGYLQIV NRGEVRLRVY ERGAGETLAC GTGACAAVVA
GIRLGLLDAR VQVHTRGGLL TIDWAGGLQD PVFMTGPATT VFEGEIDIPD AL
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