Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2990 |
Symbol | hslU |
ID | 7385435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3185588 |
End bp | 3186928 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643656300 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_002554423 |
Protein GI | 222112159 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCCA TGACTCCCCA GGAAATCGTC TCCGAACTCG ACCGCCACAT CGTCGGCCAG AACGGCGCCA AGCGCGCCGT GGCCATTGCG CTGCGCAACC GCTGGCGCCG CCAGCAGGTG GACGCCAGCC TGCGGCACGA GATCACGCCC AAGAACATCC TCATGATCGG CCCCACGGGC GTGGGCAAGA CCGAGATCGC GCGGCGCCTG GCGCGCCTGG CGGACGCGCC GTTCATCAAG GTCGAGGCCA CCAAGTTCAC CGAGGTGGGT TACGTGGGCA AGGACGTGGA TTCCATCGTC CGCGATCTGG TGGAAGTGGC CGTGAAACAG ACGCGCGAAG CCGACATGAA AAAGGTGCGC GTGCGTGCCG AAGACGCCGC CGAGGACCGC ATCCTGGATG TGCTCATCCC TCCGGCGCGC GGCGCCAGCG TCGATACCGC GCGCACCGGC GATCCCGCGG GCGACAGCAC GGCGCGCCAG GTGTTCCGCA AGAAGCTGCG CGAGGGCCAG CTGGATGACA AGGAGATCGA AATCGACCTG GCGGATGCGC GGCCGCAGTT TGAAATCATG AGCCCGGCCG GCATGGAGGA GATGACCGAG CAGTTGCGTG GCATGTTCAG CCAGATGGGC CAGGAGCGGC GTCGCGCGCG CAAGCTCAAG ATCGCCGAGG CCATGAAGCT GCTGGTCGAG GAAGAGGCCG CCAAGCTGGT CAATGAGGAA GAGGTCAAGA CGCGGGCGCT GGCCAACGCC GAGCAGAACG GTATTGTTTT CATCGACGAG ATCGACAAGG TCGCGTCGCG CCAGGAGGCC GGCGGCGCCG ACGTCTCGCG TCAGGGCGTG CAGCGCGACC TGCTGCCGCT GGTGGAGGGC ACCACGGTGT CCACCAAGTA CGGCATGGTC AAGACCGACC ACATCCTGTT CATCGCCTCG GGGGCGTTCC ACCTCGCCAA GCCGAGCGAC CTGATCCCCG AGCTGCAGGG GCGCTTCCCG ATACGCGTGG AACTCACCTC ACTGTCGGTG CAGGACTTCG AGGCCATCCT CACGCAGACC CATGCCTCGC TGGTCAAGCA GTATCAGGCG CTGCTGGAGA CGGAAGGCGT CACCCTGGAT TTCACGCCCG AGGGCATCAC CCGCCTGGCC CACATTGCCT TCGAGGTGAA CGAGCGCACC GAAAACATCG GTGCGCGCCG CCTGTCCACG GTGATGGAGC GGCTGCTGGA CGAGGTGAGT TATGACGCCA CGCGCCTGTC GGGGCAGACC GTGGTGGTGG ATGCCGGCTA CGTGAATGCA CGGCTGCAGT CGCTGAGCCA GGACGAAGAC TTGTCCCGAT ACATCCTGTG A
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Protein sequence | MSSMTPQEIV SELDRHIVGQ NGAKRAVAIA LRNRWRRQQV DASLRHEITP KNILMIGPTG VGKTEIARRL ARLADAPFIK VEATKFTEVG YVGKDVDSIV RDLVEVAVKQ TREADMKKVR VRAEDAAEDR ILDVLIPPAR GASVDTARTG DPAGDSTARQ VFRKKLREGQ LDDKEIEIDL ADARPQFEIM SPAGMEEMTE QLRGMFSQMG QERRRARKLK IAEAMKLLVE EEAAKLVNEE EVKTRALANA EQNGIVFIDE IDKVASRQEA GGADVSRQGV QRDLLPLVEG TTVSTKYGMV KTDHILFIAS GAFHLAKPSD LIPELQGRFP IRVELTSLSV QDFEAILTQT HASLVKQYQA LLETEGVTLD FTPEGITRLA HIAFEVNERT ENIGARRLST VMERLLDEVS YDATRLSGQT VVVDAGYVNA RLQSLSQDED LSRYIL
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