| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2971 |
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| Symbol | |
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| ID | 7385416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3162017 |
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| End bp | 3163861 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643656281 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002554404 |
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| Protein GI | 222112140 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.103817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCC CCGACAAGTT CGCCAGCCTG CTTGCGCTCA CGCGCGAACC CTTTCCCGCT
TCCACCAAGT CCTACCTCGC CGGCAGCCAA CCGGGGCTGC GCGTGCCGGT GCGCGACATT
CAGCTCACCA ACGGCGAAGT GGTGAGCGTG TACGACACGT CCGGCCCCTA TACCGATCCT
GCCGTGCAGA TCGACGTGCG CAAGGGCCTT GCGAGCGTGC GGGGCGAATG GATTGCCGCG
CGCGGCGACA CCGAGGGCTA TGAGGGTCGC GTACGCAAGG CGCTGGACGA CGGCCAGAAG
GCCGAGGATG GCGACCGCCT GGCCCAGCTG CGCGCCGAGG CTGCGGCGCT GCAGCGCCAG
CCGCTGCGCG CCAGGAGCGG CGCCAACGTC ACGCAGATGC ACTACGCGAA GAAGGGCATC
GTCACTCCCG AGATGGAATA CGTGGCCTTG CGCGAGAACG GTCGCCGCGA GTGGATGCAG
CAATACATGC AGGACGCCGC GCGCGAGCAG CGCCTGGCCG GCAACCCACT GGGTGCGAGC
ATTCCGAAAA TCATCACGCC CGAGTTCGTG CGCGACGAGG TCGCCCGTGG CCGCGCCATC
ATTCCCGCCA ACATCAACCA CCCCGAAGTG GAGCCCATGG CCATCGGGCG CAACTTCAAG
GTGAAGATCA ACGCCAACAT CGGCAACTCC GCCGTCACGT CGAGCATCGA GGAAGAGGTG
GAGAAGCTCG TCTGGGCCAT CCGCTGGGGC GCCGACAACG TGATGGACTT GTCCACCGGC
AAGAACATCC ACACCACGCG CGACTGGATC GTGCGCAACT CGCCCGTGCC CATCGGCACG
GTGCCTATCT ACCAGGCGCT GGAAAAGGTC GGCGGCATTG CCGAGGACCT GACCTGGGAG
ATCTTCCGCG ACACGCTGAT CGAGCAGGCC GAGCAGGGCG TGGACTATTT CACCATCCAC
GCGGGCGTGC GCCTGGCCTA CATCCAGCTC ACCGCCGCGC GCCGCACGGG CATCGTGTCC
CGTGGCGGCT CCATCATGGC CAAGTGGTGC ATGGCGCACC ACAAGGAGAG CTTCCTCTAC
ACACACTTCG AGGACATCTG CGACATCATG AAGGCGTACG ACGTGGCCTT CAGCCTGGGT
GATGGCCTGC GTCCGGGCTG CGCCTCGGAC GCCAACGACG AAGCCCAGTT TGCCGAGCTG
CACACGCTGG GCGAGCTGAC GCAGATTGCC TGGAAGCACG ACGTGCAGAC CATGATCGAA
GGCCCCGGCC ACGTGCCCAT GCACATGATC CAGGCCAACA TGACGGAGCA GCTCAAGACC
TGCCACGAGG CGCCGTTCTA CACCCTGGGC CCGCTGACCA TCGACATCGC CCCCGGCTAC
GACCACATCG CCAGCGCCAT CGGTGCCGCC ATGATCGGCT GGATGGGCAC GGCCATGCTG
TGCTACGTGA CGCCCAAGGA GCACCTGGGC CTGCCCGACC GCGACGATGT CAAGCAGGGC
ATCATTGCCT ACAAGATCGC GGCCCACGCG GCCGACGTCG CCAAGGGGCA TCCGGGTGCC
CGTGCGCGCG ACGACGCGCT GAGCCAGGCG CGGTTCGACT TCCGCTGGCA GGACCAGTTC
AACCTGGGCC TGGACCCCGA TACGGCCAAG GAATACCACG ACGAGACCCT GCCCAAGGAC
AGCGCCAAGG TGGCGCACTT CTGCTCCATG TGCGGGCCGA AGTTCTGCTC GATGAAGATC
ACGCAGGAAG TGCGCGAATT CGCCCAACAG GGCCTGCAGT CCAAGGCCGA GGAGTTCAAC
CGCACGGGCG GCGAGCTCTA CGTGCCCATC CACCGCGCCG ACTGA
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| Protein sequence | MNAPDKFASL LALTREPFPA STKSYLAGSQ PGLRVPVRDI QLTNGEVVSV YDTSGPYTDP
AVQIDVRKGL ASVRGEWIAA RGDTEGYEGR VRKALDDGQK AEDGDRLAQL RAEAAALQRQ
PLRARSGANV TQMHYAKKGI VTPEMEYVAL RENGRREWMQ QYMQDAAREQ RLAGNPLGAS
IPKIITPEFV RDEVARGRAI IPANINHPEV EPMAIGRNFK VKINANIGNS AVTSSIEEEV
EKLVWAIRWG ADNVMDLSTG KNIHTTRDWI VRNSPVPIGT VPIYQALEKV GGIAEDLTWE
IFRDTLIEQA EQGVDYFTIH AGVRLAYIQL TAARRTGIVS RGGSIMAKWC MAHHKESFLY
THFEDICDIM KAYDVAFSLG DGLRPGCASD ANDEAQFAEL HTLGELTQIA WKHDVQTMIE
GPGHVPMHMI QANMTEQLKT CHEAPFYTLG PLTIDIAPGY DHIASAIGAA MIGWMGTAML
CYVTPKEHLG LPDRDDVKQG IIAYKIAAHA ADVAKGHPGA RARDDALSQA RFDFRWQDQF
NLGLDPDTAK EYHDETLPKD SAKVAHFCSM CGPKFCSMKI TQEVREFAQQ GLQSKAEEFN
RTGGELYVPI HRAD
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