| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2964 |
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| Symbol | |
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| ID | 7384150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3153072 |
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| End bp | 3155243 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656274 |
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| Product | ribonuclease II |
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| Protein accession | YP_002554397 |
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| Protein GI | 222112133 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCAC TGTTCGACGA AGCCGGCAAG TTCCTGGCCG GCCGCATCCT CTCCGAAGCC
GAAAGCTCGG CACAGATTGA GCTCGACTCG GGTAAACGCG TCAAGGTCAA GGCCGCCAAC
ATCCTGTTGA AGTTCGACAA GCCCGCCCCG GCCGAGCTGC TGGCGCAGGC GCGCGAGATC
GCCGCCGGCG TGGAGCTTCC GCTGGCCTGG GAGTTCGCGC CCGAGGAGGA GTTCGGCTTC
GCCGAGTTGG CGCGCGACTA TTTTTCTGCC CAGGCGCCAG TGACCGAGCA AGCCGGCATG
CTGGTGGCGC TGTTCGAGGC GCCGCACTAC TTTCGCCGCG CGGGCAAGGG GCGTTTTCGC
AAGGCGTCGG CCGAGGTGCT GCAGCAGGCC CTCGCCGCCA TCGAGAAGAA GAAGCAGATC
CAGGCGCAGA TCGACGCCTG GGCCGCCGAA CTCGTCGCCG GCACCTGCCC GCAGCCCGTG
CGCGAGCAGC TCTACAAAAT TCTGTTCCGC CCCGACAAGA ACGCGCCCGA GTACAAGGCC
GTGGTCGAGG CCAGCCGCAG CGCGCAGAAG GCTCCGTTGG ACCTGTTGCA GGCCGCGGGT
GCGATCGACT CCAGCTACCA GTTCCACTGG AAGCGGTTTT TGTTCGACAA CTTCCCCAAG
GGCACGGGCT TTCCCCCGCT GGCGGCACCC CAGCCGCCGG CCGACCTGCC GCTGGCGGAT
GTACAGGCCT ATTCCATCGA CGATTCGGCC ACCACCGAGA TCGACGACGC CCTGTCGGTA
CAGGGCCTGG GCACCGGCAC CGTGACGCTG GGCATCCACA TTGCAGCGCC GGGCCTGGCG
ATCCAACCCG GGGGCGACCT GGACAAGCTG GGGCGCACGC GCCTGTCCAC CGTCTACATG
CCGGGCTACA AGATCACCAT GCTGCCTGAC GAGGTGGTGC AGATCTACAC GCTGGACGAG
GGGCGCGCCA ACCCGGCTGT GTCGCTGTAT GTGACGATCG ACGAGGCCAC GCTGGCCATC
ACCGCCACCG AGACGCGCCT GGAGCGCGTG CCCGTGACGG TGAATCTGCG CCACGACCAG
CTCGACCACA TCGTCACCGA AGAATGGCTG CAGGATGCGT CGATTCAGAC CGAAAATACG
CCTCAGGCCT TGCTGGATCT GCGTGAGCAG CTCTCCTTTT TGCACCGACT GGCCAAGCAG
CTCAAGGCCC AGCGCGAAGT CGTGCGCGGC AAGCCCGAAA CCTTCAACCG CCCCGACTAC
ACCTTCCGGC TGAGCGCCGC CCGGCCGCCC GAAGGCGCGA ACGCCCCCGC GGGGGGCAGC
GCAGGCAGCG AAGCGGCAAG CATGGGGGCC CACAAGCCCC GCAACGACGG CGCCGAGCCC
GATGGCAGCG AACAGGTGCA CATCGGCACC CGCAAGCGCG GCGCGCCGCT GGACCTGATC
GTGGCCGAGG CCGCCATCGT CGCCAACAGC ACCTGGGGCA ACATGCTGGC CGAGCACGGC
GTGCCGGGCA TCTACCGCAG CCAGGCCAGC CTGGCGCCGG GGGTCAAGGT GCGCATGTCC
ACGAAGGCGC TGCCGCACGC CGGCATCGGC GTGAAGAGCT ACGCCTGGGC CACCTCGCCG
CTGCGCCGCT ACGTGGACCT GGTGAACCAG TGGCAGATCA TTGCCTGCGC GCGCCACGGC
AAGACCGCTG CACTGGCCGC ACCGTTCAAG CCCAAGGACG CGGAGCTGTT CTCCATCATC
AGCAGCTTCG ATGCCGCCTA CAGCGCCTAC AACGGCTACC AGGCCGGCAT GGAGCGCTTC
TGGACGCTCA AGTACCTGCA GCAGAACCAG ATCACCGAGC TGGACGCCAC CGTGTTCAAG
GAAGGGCCAA ACGGTAGCTT CCTGGTGCGC GCCGACACCC TGCCACTGGT GCTGCCCGTG
CTGGGCGCGC AGCAGCTGCC GCGCGGCGCA CGCGTGCGCG TCAAGCTCGG CGAGATCGAC
GAGATCACGC TGGACGTGGC GGGCACCCTG GTGGCGCGCC TGGACGACCC GCTGGATGCC
AGCGACGACG GCCCGGTGGA CGAGGACGAG GGCGACGAGG AGGCCGTGGC CGGCCCGATC
GCCATCGCGG TCGATGTCAA CGAGGCCGAG GGCGAGGGCG CCGGCGGCAC CGCTGATAAT
CGGGCGCCGT GA
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| Protein sequence | MHALFDEAGK FLAGRILSEA ESSAQIELDS GKRVKVKAAN ILLKFDKPAP AELLAQAREI
AAGVELPLAW EFAPEEEFGF AELARDYFSA QAPVTEQAGM LVALFEAPHY FRRAGKGRFR
KASAEVLQQA LAAIEKKKQI QAQIDAWAAE LVAGTCPQPV REQLYKILFR PDKNAPEYKA
VVEASRSAQK APLDLLQAAG AIDSSYQFHW KRFLFDNFPK GTGFPPLAAP QPPADLPLAD
VQAYSIDDSA TTEIDDALSV QGLGTGTVTL GIHIAAPGLA IQPGGDLDKL GRTRLSTVYM
PGYKITMLPD EVVQIYTLDE GRANPAVSLY VTIDEATLAI TATETRLERV PVTVNLRHDQ
LDHIVTEEWL QDASIQTENT PQALLDLREQ LSFLHRLAKQ LKAQREVVRG KPETFNRPDY
TFRLSAARPP EGANAPAGGS AGSEAASMGA HKPRNDGAEP DGSEQVHIGT RKRGAPLDLI
VAEAAIVANS TWGNMLAEHG VPGIYRSQAS LAPGVKVRMS TKALPHAGIG VKSYAWATSP
LRRYVDLVNQ WQIIACARHG KTAALAAPFK PKDAELFSII SSFDAAYSAY NGYQAGMERF
WTLKYLQQNQ ITELDATVFK EGPNGSFLVR ADTLPLVLPV LGAQQLPRGA RVRVKLGEID
EITLDVAGTL VARLDDPLDA SDDGPVDEDE GDEEAVAGPI AIAVDVNEAE GEGAGGTADN
RAP
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