| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2932 |
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| Symbol | |
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| ID | 7384117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3116210 |
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| End bp | 3117991 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643656242 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_002554366 |
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| Protein GI | 222112102 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.500697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTG CCGCCAGCAC CGCCGCCGTC CACTACCGCA TCGACCCCAC GCAGACCCAC
GCCCACTTGT ACCGCGTCAC GCTCACCGTG GCGGTGCCGG CGGCGCAGCA GGAGCTGTCG
CTGCCGGTGT GGATTCCGGG CAGCTACCTG GTGCGCGAGT TCTCCAAGAA CCTGCAGTCG
CTGCAAGCGC AGCAGGGCGG CGCCCCCGTG CCCCTGCAGC AGCTGGACAA GCACCGCTGG
CGCGCGCAGT GCACGGCGGG CACGCCGCTG GTGCTGAATT ACGAGGTGGC CGCCTACGAC
ACCTCGGTGC GCACCGCCTG GCTGGACGCC ACGCGGGGCT TCTTCAACGG CACCAGCCTG
TGCCTGCGCG TGCACGGGCA AGAGGAGGCG CCGCACACGC TGGAGGTCGC GTGCCCGCCC
GCGCTGGCCG GCTGGTCGCT GGCCACGGGG CTGGAGCCGG TGGCGGTCGC ACCGTCCGGC
TTCGGGCTGT ACCGCGCACG CAACTATGAC GAACTGGTCG ACTGCCCCGT GGAGATGGGC
CCGTTCTGGA GCGCCCAATT CACCGCCTGC GGCGTGACGC ACCAGCTGGT GGTGGCGGGC
GCCGCGCCGT CGTTGGATGG CGAACGCCTG CTGCGCGACG TGCAGCGCAT CTGCGAGGAG
GCCATCCGCT TTTGGCATGG CGCGCAGCAG CCGCCGTTCA CACGCTACGT GTTCCTGCTC
AACGTGGTGC ACGACGGCTA CGGCGGGCTG GAACACGGCA ACTCCACCGC CCTCATCTGC
GGCCGGCGCG ACCTGCCGCG CGTGGGCGAG GCCGCCACGC CCGAGGGCTA CACCACCCTG
CTCGGCCTCA TCAGCCACGA GTACTTCCAC ACCTGGAACG TCAAGCGCCT GCGCCCCGCC
GAATTCGCGC GCTACGACTA CACGCGCGAG AACTACACCG AGCTGCTGTG GTTTTTCGAA
GGCTTCACCA GCTATTACGA CGACCTGCTG CTGCGCCGCG CGGGCCTGGT GGACCACGCC
ACCTACCTGC GTCTGCTGAC CAAGAACATC AACCAGATGC TGCAGACGCC GGGCCGCCAG
GTGCAGTCGG TGGCGCAGGC CAGCTTCGAC GCCTGGGTCA AGTACTACCG CCAGGATGAG
AACACGCCCA ACAGCACCGT GAGCTACTAC ACCAAGGGCG CGCTGGTGGG CCTGTGCCTG
GACCTCGCGC TGCGCCGCGA AGGCCGCACC ACGCTGGACG ACGTGATGCG CGCGTTGTGG
CAGCGCACCG GCGGCGGCCC CATGGCCGAG ACCGACCTGC TGGCCGTTTT GCAGGAGTTG
TCGGGGCGCG ACTGGTCCGG CGAGATCGGG CAGTGGGCGC ACGGCACGGC GGAGCTGCCG
CTGGCCGAGC TGCTGGCCGC CCATGGCATC CGGCTGCAGG CGGAGCCCGC GCAGATCGCC
CAGCGCCTGG GCCTGCGCGT GAACGAGAAC CACGGCGTGC ACATCAAGAC CGTGCTGCGC
GGCGGTGCGG CAGAGGCCGC CGGCTTCATG GCCGGCGACG AATGGCTGGC GCTGGAAACG
CCGGGCCAGG CCTGGCGCCT GCACAAGTTG GACGATGTGC CGCTGTACGC CGCCAGCGCC
ACCCAGATCA CGGCCCTGGT GGCGCGCGAC CAGCGTCTGA TGCGCCTGGC GCTCACTCTG
CCAGGCGCCG GCGCGGCCTT TGACACGGTG CGACTGGACG TGCAGGACGC CGCCGTGGCC
CAGCGCTGGC TGGGGCCGGC CCAGCCGGGT CCTCAGGCAT GA
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| Protein sequence | MSFAASTAAV HYRIDPTQTH AHLYRVTLTV AVPAAQQELS LPVWIPGSYL VREFSKNLQS
LQAQQGGAPV PLQQLDKHRW RAQCTAGTPL VLNYEVAAYD TSVRTAWLDA TRGFFNGTSL
CLRVHGQEEA PHTLEVACPP ALAGWSLATG LEPVAVAPSG FGLYRARNYD ELVDCPVEMG
PFWSAQFTAC GVTHQLVVAG AAPSLDGERL LRDVQRICEE AIRFWHGAQQ PPFTRYVFLL
NVVHDGYGGL EHGNSTALIC GRRDLPRVGE AATPEGYTTL LGLISHEYFH TWNVKRLRPA
EFARYDYTRE NYTELLWFFE GFTSYYDDLL LRRAGLVDHA TYLRLLTKNI NQMLQTPGRQ
VQSVAQASFD AWVKYYRQDE NTPNSTVSYY TKGALVGLCL DLALRREGRT TLDDVMRALW
QRTGGGPMAE TDLLAVLQEL SGRDWSGEIG QWAHGTAELP LAELLAAHGI RLQAEPAQIA
QRLGLRVNEN HGVHIKTVLR GGAAEAAGFM AGDEWLALET PGQAWRLHKL DDVPLYAASA
TQITALVARD QRLMRLALTL PGAGAAFDTV RLDVQDAAVA QRWLGPAQPG PQA
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