| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2892 |
|---|
| Symbol | |
|---|
| ID | 7384077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3074313 |
|---|
| End bp | 3075608 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643656202 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_002554326 |
|---|
| Protein GI | 222112062 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TCATCCAGAA CGGCCGCGTC ATCGACCCCG CCAGCGGCCT CGACAAGGTG
TGCAACGTGG CGCTGGCGGC GGGCCGCATC ATCGCGGTGG ACCGCGAGCC CCAGGGTTTC
ACGCCCACCC GCGTGATCGA TGCCAGCGGC TGCCTGGTGC TGCCGGGTCT GGTGGACCTG
GCGGCGCGCC TGCGCGAGCC GGGGCATGAG CATGAGGGCA TGCTGGAGTC CGAGATGGCG
GCGGCCGTCG CGGGTGGCGT GACCAGCCTG GTCTGCCCGC CCGACACCGA CCCGGTGCTC
GACGAGCCTG GCCTGGTGCA GATGCTCAAG TTCCGCGCCG AGAAGCTGCA CCAGGCGCGG
CTGTTCCCCT TGGGCGCAGT CACGCGTGGG TTGGCCGGCG AGGTGCTGAC CGAGATGGCC
GAGCTGACGG AGTCCGGCTG CGTGGGCTTC AGCCAGGCCG AGGTGCCGCT GACCAGCACC
CAGGTGCTGC AGCGCGCGCT GCAGTACGCC GCGACCTACG GCTACACCGT CTGGCTGCGC
CCGCAGGAAC TGCACCTGGG CAAGGGCGTT GCCGCCAGCG GCCCCCTGGC CACACGGTTG
GGCCTGTCGG GCGTGCCCGT GGCAGCGGAG ACGATCGCAC TGCACACCAT CTTCGAGTTG
CTCAAAACCA CGGGCGCGCG CGTGCACCTG TGCCGCCTGT CCAGCAGCGC GGGGGTGGAT
CTGGTGCGGC AGGCCAAGGC GGCGGGTCTG CCGGTGAGCT GCGACGTGAG CATCAACTCG
CTCATGCTCA CCGATGCGGA CATCGGCTAC TTCGACAGCC GCGCGCGCCT CACGCCGCCG
CTGCGCCAGC AGCGCGACCG CGATGCGCTG GCCGCGGCGC TGCTGGATGG CACCATCGAC
GCGTTGGTGT CCGACCACAC GCCGGTGGAC GAGGATGCCA AAGCTTTGCC ATTTGCCGAG
GCCGAGCCCG GCGCGACGGG GCTGGAGTTG CTCCTGTCCG TGGCTCTCAA GTGGTCGCAG
GAAGGCGGCG CGCCGCTGCA GCGTGCGCTG GCCGTGGTCA CCGCAGAGCC CGCGCGGGTG
CTGGGCACGT CGCTGGGCAC GCTGCAGGCC AGCGTGGGCC GCATTATCGA AGGCGGGGTG
GGCGACCTGT GCGTGCTGGA CCCTGCGGCG CATTGGACCG TGCAGGCCGA CGCACTGGCC
AGCCAGGGCA AGCACACGCC GTTCTCGACC TATGAACTGC CGGGCCGGGT GCGCTGCACG
CTGGTGGGCG GCCAGGTCGC GTTCGAGCGC GGCTGA
|
|---|
| Protein sequence | MKILIQNGRV IDPASGLDKV CNVALAAGRI IAVDREPQGF TPTRVIDASG CLVLPGLVDL
AARLREPGHE HEGMLESEMA AAVAGGVTSL VCPPDTDPVL DEPGLVQMLK FRAEKLHQAR
LFPLGAVTRG LAGEVLTEMA ELTESGCVGF SQAEVPLTST QVLQRALQYA ATYGYTVWLR
PQELHLGKGV AASGPLATRL GLSGVPVAAE TIALHTIFEL LKTTGARVHL CRLSSSAGVD
LVRQAKAAGL PVSCDVSINS LMLTDADIGY FDSRARLTPP LRQQRDRDAL AAALLDGTID
ALVSDHTPVD EDAKALPFAE AEPGATGLEL LLSVALKWSQ EGGAPLQRAL AVVTAEPARV
LGTSLGTLQA SVGRIIEGGV GDLCVLDPAA HWTVQADALA SQGKHTPFST YELPGRVRCT
LVGGQVAFER G
|
|---|
| |