Gene Dtpsy_2883 details

Gene Information

• Locus tag: Dtpsy_2883
• ID: 7384994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3060035
• End bp: 3061939
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643656192
• Product: surface antigen (D15)
• Protein accession: YP_002554317
• Protein GI: 222112053
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0729] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.420526
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGC CAAGCTCAGC GCCGGCCCGG TGGCCGGCGT TGCTGTTTCT GCTGATCGGC 
CTGGCCCTCT TGCAGGGCTG CAGCCTGCTG CAGCGCCCCT CTTCCGCGCC GCACGACGCA 
CCCTCTTCCA TCACCTCCGA GGCGGGCCCG GACTCCGGCC CCGATGCGTT CGCGCTGGAT 
GTGCAGGTGG AGGACGACAC CCTGCGCGAG TACCTCACGC GCCATCTGGA GCTGCAGCGC 
TTTCGCCAAC TGCCCGACCT GCAGGCGCAT GAACTCACGC GGCTGCTGGG TTCCGCCGAC 
GCGAACGCCC GCGACCTGCT GGCCACGCAG GGCTACTTCA GTCCCGAGAT CACCATCGAG 
CTGCGCGAGC AGGCCACCGA CGCCGACGCG CCCCCGCGCA CCGTGCTGGT CAGCGTGTCG 
CCCGGCCCGC GCACGCACAT CGCCAGCGCC GACATCACGC TGATGGGCGA GGACGGCCAC 
GGTGCCGACG CGACCGAGCT CGCACGCCGC CAGGCCCGGT TGCAGCGCGG CTGGTCGCTG 
CCGCCCGGCG AGCCGTTCAC GCAGCAGGGC TGGGACAGTG CCAAGAACCA GGGCCTGCGC 
GATCTGCAGG CGCGCCGCTA CCCCACGGCG CGCATCGCCA GCAGCCGCGC CGAGGTGGAC 
GCCGACCGCG CCGAGGCCAA GCTGCAGGTG GCCTACGCGC CTGGCCCGGC CTACCGTTTT 
GGCACCCTGC AGATCCAGGG TGGCGAGCGT TACGACAACG AGGGCATGCG CCGTATTGCG 
CGCCTGCCCA CGGGCGAGGA CTACAGCGAG GCGCGCCTGC TGGACACCCA GCAGCGCCTG 
GCCAGCAGCG GCTATTACGA CGCGGTGTTC CTCACGCTGG ACACCGAGCA CGGCGACCCG 
CAGTCCGCCC CCGTGATTGC CCAGGTGCGC GACGCACCGC TGCAAAAAAT GGTCTTCGGC 
GTCGGTATCT CCACCGACAG CGGGCCGCGC CTGTCCATGG ACCACACGCA CAACCGCCTG 
CCGGGCTTGG GCTGGCGCGC CGTGAGCAAG GTGGCGGTGG ACAACAAGCG CAAGCTGCTG 
TCCACCGACT GGACCGGGCT GCCGCATGCG AACGGCTGGC GCTGGTTCAC GGGCCTGCAG 
CTGCAGCGCG AGGCCACGGG CAGCTACGAC GTGGACAGCT CGCGGCTGCG CGCCGGGCGC 
ACCAAGAGCA CGGACCGCAT CGACCGCAGC TACTTCCTGC AGCACGACAC GGCCAAGAAC 
CGCGGCGAGG ACGCGCCGCC GTCCAGCAGC GCGATCTCCG CCAACTACGG CTGGACGGGG 
CGCTACTTCA ACAACAACAC CAACCCCACG CGCGGCTGGG GCCTGGCGGC CGAGCTGGGC 
GTGGGCACCA CACTGCGCCC GGAGCGCGAC CCCTTCGTGC GCACCCTGCT GCGCTGGCAG 
TCCTTCGTCG GGCTGGGCCG CGTGGACCTG GGGAACAACG TGCGCCGCGG CAGCCGCCTG 
TCGCTGCGCC TGGAGGGCGG CGCGGTGCTG GCGCGCGACG GCGCCGACAT CCCCGTTACC 
CAGCTGTTCC TGACCGGCGG CGACACCACC GTGCGCGGCT ACGGCTACCG CAGCATCGGC 
GCGCGCACCG ACGCGGACAA GCTCTTCGGC GGGCGCTACA TGGCCGTGGG CAGCGCCGAA 
TGGCAGCGCC CCATCACCGT GCGCGGCAAC CGCACCGACT TTGAGAGCGC CCTGTTCATC 
GACGCCGGCG CCGTGGCCGA CACACCTGGC GATCTCACGG CGCGCGTGGG CGTGGGTGCA 
GGCCTGCGCT GGCAAAGCCC GGTGGGCCCG CTGCAGGCCG ACCTGGCCTA TGGCCTGCAC 
ACGCACCAGG TACGGCTGCA CCTGCGGCTG GGCTACACGT TCTGA 

 

Protein sequence

MTKPSSAPAR WPALLFLLIG LALLQGCSLL QRPSSAPHDA PSSITSEAGP DSGPDAFALD 
VQVEDDTLRE YLTRHLELQR FRQLPDLQAH ELTRLLGSAD ANARDLLATQ GYFSPEITIE 
LREQATDADA PPRTVLVSVS PGPRTHIASA DITLMGEDGH GADATELARR QARLQRGWSL 
PPGEPFTQQG WDSAKNQGLR DLQARRYPTA RIASSRAEVD ADRAEAKLQV AYAPGPAYRF 
GTLQIQGGER YDNEGMRRIA RLPTGEDYSE ARLLDTQQRL ASSGYYDAVF LTLDTEHGDP 
QSAPVIAQVR DAPLQKMVFG VGISTDSGPR LSMDHTHNRL PGLGWRAVSK VAVDNKRKLL 
STDWTGLPHA NGWRWFTGLQ LQREATGSYD VDSSRLRAGR TKSTDRIDRS YFLQHDTAKN 
RGEDAPPSSS AISANYGWTG RYFNNNTNPT RGWGLAAELG VGTTLRPERD PFVRTLLRWQ 
SFVGLGRVDL GNNVRRGSRL SLRLEGGAVL ARDGADIPVT QLFLTGGDTT VRGYGYRSIG 
ARTDADKLFG GRYMAVGSAE WQRPITVRGN RTDFESALFI DAGAVADTPG DLTARVGVGA 
GLRWQSPVGP LQADLAYGLH THQVRLHLRL GYTF