Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2874 |
Symbol | |
ID | 7384985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3053353 |
End bp | 3054156 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643656183 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002554308 |
Protein GI | 222112044 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGACA CCCCCCTTTC CGTAAGTAAT ACCCACAAGC CGGGGGATAG CTACGTGCAG TCGTTTGCAC GCGGGCTGGA GGTGATCCGC TCCTTCAGCG CGGCGGCGCC GCAGCAGACC CTGAGCGAAG TCGCGGCACG CACCGGCCTG ACGCGCGCAG GCGCGCGCCG CATCTTGCTG ACGCTGCAGA CGCTCGGGTA TCTGGAGAGC GATGGCCGGC TGTTCCGCCT CACGCCGCGC ATCCTGGACC TGGGCTTTGC CTACCTCAGT TCCATGCCCA TCTGGGACCT GGCCGAGCCG CTGATGGAGG CCCTCACCGA CCGCGTGCAT GAGTCCTGCT CCGCCGCCGT GCTGGACGGG CTGGACATCG TCTATGTGCT GCGCGTACAC ACCCACAAGA TCATGAGCAC CAACCTGGCC GTGGGCTCAC GCCTGCCGGC ATTCTGGACG TCGCTGGGCC GCGTGCTGCT GGCCGAGCTG CCCGAGCAGG AACTGCGCGC CCGACTGGCC GCGCTGCCGC GCCAGCAGTT CACGCGCCAC ACGGTGCTGG ACGATGCGAC GCTGCTCGCG CGCATCGCCC AGGCACGCGC CCAAGGCTGG TGCCTGGTGG ATCAGGAACT GGAAGAGGGT TTGATTTCGG TGGCCGCGCC GCTCAAGAAT CGGGCGGGCC AGGTGGTGGC GGCCCTGAAC ATCAGCGGCC AGGCCAATCG CACCAGCACC GAAATGCTGC GCGAGCAGTT GCTGCCCGAG TTGCTGGCCA CGGCTCAGAC CATCTCGCGC ATGCTGGGCA CGCGCAGGCC CTGA
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Protein sequence | MDDTPLSVSN THKPGDSYVQ SFARGLEVIR SFSAAAPQQT LSEVAARTGL TRAGARRILL TLQTLGYLES DGRLFRLTPR ILDLGFAYLS SMPIWDLAEP LMEALTDRVH ESCSAAVLDG LDIVYVLRVH THKIMSTNLA VGSRLPAFWT SLGRVLLAEL PEQELRARLA ALPRQQFTRH TVLDDATLLA RIAQARAQGW CLVDQELEEG LISVAAPLKN RAGQVVAALN ISGQANRTST EMLREQLLPE LLATAQTISR MLGTRRP
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