| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2850 |
|---|
| Symbol | |
|---|
| ID | 7384961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3032980 |
|---|
| End bp | 3033900 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643656159 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_002554284 |
|---|
| Protein GI | 222112020 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.859751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG CTCCTGCTCC CGCCCCCGCC GCCGCAGCGC CGCGCGCTCT GCCGTCGCGG
CTGTCCCAGT TCTACGCGCT GACCAAGCCG CGTGTGGTGC AGCTCATCGT GTTCTGCGCC
TTCATCGGCA TGGTGCTGGC CGTGCCGGGC ATGCCCAGCG GCGCGCAGTG GGCGTTGATG
GCCGTGGCCA GCGCGGGCAT CTGGCTCGTG GCTGGTGCGG CGGCGGCGTT CAACTGCATC
GTGGAGCAGG GCATCGACGC CAAGATGAAG CGCACGGCCT GGCGCCCCAC GGCCAAGGGC
GAGCTGTCCA ACACGCAGAC GCTGCTGTTC TCGGCGCTGC TGTGTGCGGC GGGCTCGGCG
CTGCTGTACT GGTGGGTCAA CCCGCTGACC ATGTGGCTGA CCTTCGCCAC GTTTGTCGGC
TATGCGGTGA TCTACACGGT GATCCTCAAG CCGCTCACGC CGCAGAACAT CGTGATCGGC
GGCGCCAGCG GCGCCATGCC GCCCGTGCTG GGCTGGGCTG CGATGACCGG CGAGGTGGGC
CCCGAGGCAC TGATCCTGTT CCTCATCATT TTCCTGTGGA CGCCGCCGCA CTTCTGGGCA
CTGGCGCTGT ACCGCGTGGA GGACTATCGC AAGTCCGGCC TGCCCATGCT GCCCGTCACC
CACGGCAACG AGTTCACGCG CCTGCAGGTG TTTCTCTATA CCTTGATCCT GTTCGCAGGC
TGCCTCATGC CTTTCGTGTA CGGTATGAGT TCGTGGATCT ACCTTGCAGC CGCCGTGGTG
CTGAGCGCGG GCTTTTGCCT GTACGGCTTC CGGCTGTGGC GCGACTACTC CGACACGCTG
GCGCGCAAGA CCTTTCGTTT CTCGCTGATC CACCTGAGCC TGCTGTTCGC GGCGCTGCTG
GTGGACCACT ACCTCCTGTG A
|
|---|
| Protein sequence | MSAAPAPAPA AAAPRALPSR LSQFYALTKP RVVQLIVFCA FIGMVLAVPG MPSGAQWALM
AVASAGIWLV AGAAAAFNCI VEQGIDAKMK RTAWRPTAKG ELSNTQTLLF SALLCAAGSA
LLYWWVNPLT MWLTFATFVG YAVIYTVILK PLTPQNIVIG GASGAMPPVL GWAAMTGEVG
PEALILFLII FLWTPPHFWA LALYRVEDYR KSGLPMLPVT HGNEFTRLQV FLYTLILFAG
CLMPFVYGMS SWIYLAAAVV LSAGFCLYGF RLWRDYSDTL ARKTFRFSLI HLSLLFAALL
VDHYLL
|
|---|
| |