| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2805 |
|---|
| Symbol | |
|---|
| ID | 7384916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2989096 |
|---|
| End bp | 2990328 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643656114 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_002554239 |
|---|
| Protein GI | 222111975 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACT CCCCTGCCCC TGCGCACACC GGCCTGGTGC TGATGGGCGG CGGCGCGCGT
GCCGCCTACC AGGTGGGCGT GCTGCAGGCG ATTGCCGACC TGCGGCTGGC TTGCGGCGAG
CGGCGCGGGC CGGGGCCATT CGGCATCCTC ACCGGCACCT CGGCCGGCGC CATCAACGCG
GCGGCCCTGG CCTGTGGCGC GGACCAGTTC GACCGCACGG TGCGGCGCCT GGCGCGCGTG
TGGACCCAGT TCCATGCCCG ACAGGTGTAC CGCGCCGACT CCCTGAGCGT GATGCGCAGC
GGCGCACGCT GGCTCACGCT GCTGTCGCTG GGCTGGGCCC TCACCCGTTG GAGCCGCATG
CGCCCGCACT CGCTGCTGGA CAACGCGCCG CTCGCGCAAC TGCTGGACCA ATTGGTGCCA
CTGGCGCGCG TGTCGCGGCT GATCCGCGCG GGCCACCTGC GCGCCCTGGC GGTGACAGCG
TCCAGCTACA GCTCGGGCCA GCACGTGGCG TTCTTTGACG CCGGAGACGC CCAGGAGCCC
TGGGTACGCT CATTGCGCAA ATCCGCGCGC GGCCCCATCA CGCGCAACCA CCTGCTGGCC
TCGTCGGCCA TTCCCTTCAT GTTCCCGGCA GCGCCACTGG CCATCGACGG GCACACCGAA
TACTTCGGCG ACGGCTCCAT GCGCCAGACC GCGCCGCTGG CGCCCGCCAT CCACCTGGGT
GCGCGGCGCC TGCTGGTGGT GGGCACCAGC CGCACCTATG AGCCGCCGCG CCCCTGCATG
GCTGGCACGC AGCAGCCCTA CCCGGCGCTG GCCCAGGTGG CGGGCCACAC GCTGTCCAAC
ATCTTTCTGG ATGCGCTGTC GGTGGATATC GAGCGCGCCC AGCGCATCAA CCAGACGCTG
GCGCTGATTC CGCCCGAGGC GCGCAGCCAC AGCCCGCTGC GGCCGCTGGA GCTGCTGGTG
TTCGCCCCCT CGCGCAACCT GGACGAGATG GCGGCACGGC ATGTGTGCGA TCTGCCGGGG
ACCATCCGCA CCCTGCTCAG CGCGCTGGGC GTGCGCGCCG ACCGGCCTGA CGCGGGCACC
GGCGCGCTGG CCAGCTATTT ACTGTTCGAG CGCGGCTACA CGCGCGAGCT CATGGCACTG
GGCCACGGGG ACGCGCTGGC GCGGCGCAGC GAGATCTGCG CCTTCTTCGG CTGGCAGGAC
CACGGCAATC CCGTGCGGGC GCCGCGGAAC TGA
|
|---|
| Protein sequence | MTHSPAPAHT GLVLMGGGAR AAYQVGVLQA IADLRLACGE RRGPGPFGIL TGTSAGAINA
AALACGADQF DRTVRRLARV WTQFHARQVY RADSLSVMRS GARWLTLLSL GWALTRWSRM
RPHSLLDNAP LAQLLDQLVP LARVSRLIRA GHLRALAVTA SSYSSGQHVA FFDAGDAQEP
WVRSLRKSAR GPITRNHLLA SSAIPFMFPA APLAIDGHTE YFGDGSMRQT APLAPAIHLG
ARRLLVVGTS RTYEPPRPCM AGTQQPYPAL AQVAGHTLSN IFLDALSVDI ERAQRINQTL
ALIPPEARSH SPLRPLELLV FAPSRNLDEM AARHVCDLPG TIRTLLSALG VRADRPDAGT
GALASYLLFE RGYTRELMAL GHGDALARRS EICAFFGWQD HGNPVRAPRN
|
|---|
| |